Latimeria chalumnae (coelacanth): 102365897
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Entry
102365897 CDS
T02913
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102365897
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102365897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
DUF3271
Motif
Other DBs
NCBI-GeneID:
102365897
NCBI-ProteinID:
XP_005990988
Ensembl:
ENSLACG00000014690
LinkDB
All DBs
Position
Un
AA seq
1214 aa
AA seq
DB search
MVDKIQKDGSWIPKIVKKRVCNTFIEESRGADSGETLCQCGNPKNTHTTIATEDNFAAAM
VSSWSMALHTQEKPTDAFGDIEFAGAGKKHNKFLRLSCDTDPAIIYHFLTSHWKIPPPNL
VVSVVGGDEHFKVKNWLKDIVRKGLVKATQSTGAWIITRGLRFGIGKYVGEAVRDHSTAN
TSSRTKIVALGIAPWGIIHNRDCLVNPKGSFPATYYMEDMGGPTFSLDNNYSAFLLVDDG
RTGHSGGEMHFQTQLEKFISKQKTGVGGKGSIEIPVLCMLIAGDESMLERVCAVTKNMIP
WLVLAGSGGAADLLAEVLEASPTAESLREVVEKKVKKFFPQKDLHRLVDLVEKIVQNKDL
LTVYTDQEGMEEFDNVILKALVKACKSQTGNSVEYLDELKLAVAWNRVDIAKSELFQGDI
YWKSNDLEDTMTDALINNKPEFVKLFVDNGLNIVEYLTYQRLEELYSSVAENSLLHYLLR
RVLQRNPEPQPHAPLSKGREFSVYMVSKVLKDFLGGVCEPFYADLVGVYKTQSSKKDSKY
LLTGAAENSYENKKSSCPWADLFIWAILQNRDEMAAYFWEMGGESVTSALAACLILKEMS
HVEDEAESSHNMKKLAAKFEQLAVDVFSECYNNSESRAFTLLVRRSPIWGRATCLQLANV
AGARNFFAQDGVQSLLTQIWWGELDRSTEVWKFLLTFFCPPLMYTTLIKFRDKEEDIKRE
NHHASPLELESFDGDTKYSLRDLAIGDWGKGDMYLKNLDNISDINTWTREPGSSKVHEAR
RSQLFVVKRWKQFWYAPVASFLGNLVMYFAFLLLFSYVLLIDFKGAPPKGPSNVEFLLYF
WVFTLAMEEIRQSMFVGNLPLRINLNQYLKDVWNKCDIIAILLFLLGLIFRMFPATYASG
RTVLCLDFMVFALRLIHIFAVHKELGPKIVIVGKMMKDVFFFLFFLGVWLMAYGVTTQGL
LHPNDHRLEWIFRRVFYRPYLHIFGQIPLEEIDAAHFPSSNCTDEGEGPPCTNTYANWLV
LILLVIYLLVANILLVNLLIAMFSYTFTKVMDKSDIHWKFQRYNLIVEYHSRPALAPPFI
ILSHIHLLIKRNIRKVKSVKSKHFMLDLSEARDSKLMTWEAIQKENYVVNQNKVKRESDT
ERLKRMSQKVDNILTNMSEIREHDRRLQVLESELDYCTSAISWMVESLDQSNLIKSSRPP
PTVEDFVSSGQKQV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggttgacaaaatacagaaggatgggagttggattcccaagatagtcaagaagagagtc
tgcaacaccttcatagaggagagcagaggagccgacagtggagagactctctgtcaatgt
ggaaatcccaaaaacactcacactaccatagcaacagaggataactttgcagcggccatg
gtgagctcctggagcatggcgctgcacacgcaggagaagccgactgatgcctttggagac
atcgagtttgccggggctgggaagaagcacaataagttcctccgtctgtcatgtgatacc
gaccctgccatcatttaccacttcctgaccagtcactggaagatcccacccccaaacctg
gtggtgtctgtggtgggaggagatgaacattttaaagtcaaaaactggctgaaggatatt
gtccgtaaggggttggtcaaagccacccagagcacaggagcttggatcattaccaggggg
cttcgcttcggaatcgggaagtatgtgggagaagcagtccgagaccattccacagccaac
acaagctccagaacgaaaattgtggccctgggcatcgcaccctggggaatcatccacaac
cgagactgtctcgtcaaccccaagggctccttccctgccacttattacatggaagatatg
gggggccccaccttctccctggataacaactactctgctttcctccttgttgacgatggg
aggaccggacattctgggggggaaatgcatttccaaacccaactggagaagttcatttcc
aagcagaagacgggggttgggggtaaagggagcattgaaattcctgttctctgtatgctg
attgctggagatgagagtatgctggagagagtctgcgctgtgactaagaacatgattccc
tggctggttctggcaggatccggaggagctgcagacttgctggctgaagttctagaggca
tcaccgacagcagagtctctccgggaggttgtggaaaagaaagtgaagaagttcttccca
cagaaagatctccacagactagtggacctggtggagaagattgtgcagaacaaggacctt
ctgacagtgtacacagaccaagagggcatggaggaatttgataatgttatcttgaaggcc
cttgtcaaagcgtgtaagagccagaccggcaactctgtggaatatctcgatgaactgaaa
cttgcagtggcttggaaccgcgtggatattgccaagagcgagttgttccagggagacatc
tactggaagtcaaatgacctggaggacaccatgactgacgctctgatcaacaacaagccg
gagtttgtgaagctctttgtggacaatggcctgaacattgtggagtacctgacctatcag
agactggaggaactgtacagctccgtggctgagaactcccttctccactatctcctccgg
agggtgctccaaaggaacccggagccacagccccatgctcccctcagcaagggccgggaa
ttttctgtctacatggtctccaaggtgctgaaggattttcttggaggggtctgtgagccc
ttctatgctgacctggtcggagtctacaagactcagagctccaagaaagactcaaagtac
ctgctgacaggtgctgctgagaactcctatgagaataagaagtcgtcctgtccttgggcc
gacctcttcatctgggccattctgcagaacagggatgaaatggccgcctacttctgggag
atgggtggtgagtctgtaacctctgccctcgcggcctgtctgattctgaaggagatgtct
cacgtggaggacgaggcggagagttctcacaacatgaagaaattggcagcaaagtttgag
cagctggccgtagatgttttcagcgagtgttataacaacagcgagagccgtgccttcaca
ctgttggtgcgccggtctccaatctggggcagagccacctgtcttcagctagccaacgtg
gcgggagccaggaatttctttgcacaggatggggttcagtctctcctaactcagatctgg
tggggcgagctggacaggagcactgaagtctggaaatttctcctcaccttcttctgccct
ccactaatgtataccactctcatcaaattcagggataaagaagaggatataaagagggag
aaccatcacgctagcccgctggagttagagagcttcgatggagacaccaagtactcgtta
cgggatctggccatcggtgactggggaaagggagacatgtatttgaagaatctggacaat
ataagtgacatcaatacctggaccagggagccaggcagcagcaaagtgcacgaagcaagg
aggtcgcagctcttcgtggtgaagcgctggaagcagttttggtacgcaccagtcgcctcc
ttcctgggcaacttggtcatgtattttgcctttctactgctgttctcttatgtgctacta
atcgatttcaagggggccccaccaaaaggaccctcaaacgtcgagttcctcctttacttc
tgggtcttcacactagcaatggaagaaatccgacagagtatgtttgtgggtaacctgcct
ttaagaataaacctgaaccagtacctaaaggacgtatggaacaagtgtgacatcatcgcc
attctgctgttcttattgggcctaatcttcaggatgtttcctgccacgtatgcatcgggt
cggaccgtcctctgtctggatttcatggtctttgcccttcgactgattcatattttcgct
gtccacaaggagcttggacccaaaattgtcatcgtggggaaaatgatgaaggatgtattt
ttcttcctcttcttcctgggggtctggttgatggcatacggggtcaccacccagggcctg
ttacatcccaacgaccaccgcctggagtggatattcaggcgggttttctaccgaccttac
ctgcacatctttggacagattccactggaagagattgatgctgctcatttcccttcctcc
aactgtactgatgaaggagagggcccaccctgtaccaacacctatgccaactggctggtc
ctcatccttctcgtcatctacctgctggtggccaacatcctcctggtgaatctcctgatc
gccatgttcagttataccttcaccaaagtcatggataaaagtgacatccactggaaattc
caacgctacaacctgatcgtagagtaccacagtcgtcctgccctggccccacccttcatc
atcctcagtcacatccacctgctcatcaaacgtaacatccgtaaagtcaagtctgtcaag
agcaaacacttcatgctggacctcagcgaagcaagggacagcaagctgatgacctgggag
gcgatacagaaggagaactatgtagtaaaccagaataaggtgaaaagggagagtgacaca
gaacgcctgaagagaatgtcacaaaaagtcgacaacatattgacaaacatgagcgagatc
cgagaacatgacaggcgtctgcaagtcctggaatcagagctggattactgcaccagcgcc
atctcctggatggtggaatcactggaccaaagtaacctgataaaaagcagccggcctccg
cccactgtggaagactttgtgtcgtcgggacaaaaacaggtctga
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