Latimeria chalumnae (coelacanth): 102366443
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Entry
102366443 CDS
T02913
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102366443
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102366443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Na_trans_cytopl
FraC
Motif
Other DBs
NCBI-GeneID:
102366443
NCBI-ProteinID:
XP_006003324
Ensembl:
ENSLACG00000009665
UniProt:
H3AMW3
LinkDB
All DBs
Position
Un
AA seq
1836 aa
AA seq
DB search
MAGLRVTPGPDMLRRFTRESLAEIEKRFAKKQADKAKKKHVELNEDLAPKPSSDLEVGKS
LPFIYGDLPPELIGVPLEELDPFYSGERTFIVINRGKTINRFSTTPALYLLSPFSSVRRG
AIKVLIHSLFSFFIMITILTNCVFMTMSAPPPWAKNVEYTFTGIYTFESMIKILARGFCI
DSFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPPPFNDTWTDFDLGMGNDTF
HNTTIYDSAAAYSNTTFDWDAYLNNEENFYFLDGQLDALLCGNSSDAGRCPEGFLCMKAG
RNPNYGYTSFDTFSWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLI
NLILAVVAMAYAEQNEATLEEAKQQEEEFQRQLEQLKKQQEEQAAKLHGSSGQHLSSKDS
LASSKGQKRDMDTKSDDEQSGGEGRKMANDWNGRPVPSVVIDRVSTGEESETIDREQEKT
ASNHPSIDHLEEPTLQKRTASIVSVVSNTMEELEEAHQKCPPWWYKFAYKFLIWDCCILW
VKFKEIVKFIVMDPFVDLGITICIILNTMFMAMEHYPMTPQFENVLSIGNLVFTGIFTAE
MVFKIIALDPYYYFQIGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISSDCVLPRWHM
TDFFHAFLIVFRILCGEWIETMWDCMEVAGQPLCFIVFMMVMVIGNLVVLNLFLALLLSS
FSADNLSASDDDNEMNNLQIAINRITRGVDFIKSLPVRLLQGIRRTDNEDDDQKKEDYVL
NHMDPVPESKSDFKPVDGVASKEPHLADEVDQMSFMDNPSIAVRVPIAAAESDLEIADEE
MTSESETEDVKKKESDIGSSRCSTADYQAPEVVEEVVAEEEPENEDPEPCFTEGCIRRCP
CLTVDITQGSGKLWWTLRKTCFKIVEHNWFETFIIFMILLSSGALAFEDVYIERRRVVKI
ILEYADKVFTYVFVVEMLLKWTAYGFKTYFTNAWCWLDFLIVDVSLISLTANWMGYSELG
PIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFA
GKFYRCVNTTTGELFDVSMVNNKSDCFSLYDTGEVRWMNVKVNFDNVGFGYLSLLQVATF
KGWMEIMYAAVDSREVEEQPSYEINLYMYLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKK
KFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGVVFDFVSKQAFDIFIMVLI
CLNMVTMMIETDDQSAEKEEILYWVNLVFIVVFTGECILKIIALRHYYFTMGWNIFDFVV
VILSVVGIMLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYSIFGMSNFAYVKREAGIDDIFNFETFGNSIICLFQITTSAGWDGLLS
PILNSGPPDCDPTIENPGTDVKGDCGNPSVGIVFFCSYIIISFLIVVNMYIAIILENFNV
ATEESAEPLCEDDFEMFYETWEKFDPDATQFIDYCKLSDFVDTLQDPLKIPKPNRIKLIT
MDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITSTLK
RRHEEVSVTIIQRAYRRHLFMRSVKQASYMYRQNEECSPDEEAPEKEGLIATKMKAFYGK
GNETEEEMPASAPRTGTSPSEDKDWDEKGNVRESIV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgcgggttacaccaggtcctgatatgctgcgtcgtttcacccgagagtca
cttgcagaaattgaaaaacgttttgctaagaagcaagcagataaggcaaagaaaaagcat
gtagagctcaatgaagaccttgcaccaaaacccagcagtgatctggaggttggaaaatct
ctccccttcatctatggagatcttcctcctgaacttattggtgtgccgttggaggagtta
gatcctttctatagtggagaaaggacctttatagttattaacagagggaagaccatcaac
cgttttagcaccactcctgctctctacctattgagtccttttagttcagtcagaagagga
gctattaaagtcttaatacattcgttatttagcttttttatcatgataacaattttaaca
aactgtgtgtttatgacaatgagtgctccccctccctgggcaaaaaatgtagagtatact
tttacaggtatttatacctttgaatcaatgataaagattttggcaagagggttctgtatt
gatagttttacattccttcgagatccatggaactggcttgacttcagtgtcattgttatg
gcgtatgttactgagtttgtagatttgggtaatgtctcagctttaagaacatttcgagtc
ttaagagcgcttaaaaccatcactgttattccaggcttaaaaacaattgttggcgcattg
atacagtctgtaaagaagctttcagatgtcatgattcttactgttttctgtctaagtgtt
tttgcactgattggtcttcagctattcatgggtaacctcagacaaaaatgtgttatatgg
ccgccccctttcaatgacacctggacagattttgacttggggatgggaaatgacaccttt
cataatacaactatctatgacagtgcagctgcttatagcaacactacttttgactgggat
gcctatctcaacaatgaagagaacttctactttcttgatggacaactggatgcccttctt
tgtgggaatagctctgatgctgggaggtgcccggaaggttttttgtgtatgaaagctggg
aggaaccctaattatggttatacaagctttgataccttcagctgggctttcctttcactc
tttcgtctcatgacacaagactactgggagaacctttttcagctgacattgcgagctgct
ggcaaaacgtacatgattttttttgtggtgattatattcctgggttccttttatcttata
aatctgatcctggctgtggtagccatggcctatgctgaacaaaatgaggccacgcttgag
gaagccaaacaacaagaagaagaatttcagcggcagctggaacaactgaagaaacagcaa
gaggagcaggcagctaagttgcatggatcttctggacaacatctttctagcaaagattcg
ttggctagtagtaaaggtcagaaaagagacatggatacaaaaagtgatgatgaacagagt
gggggcgaaggtagaaaaatggcaaatgactggaatggaagacctgtgccatcagtagta
atagatagagtttccacaggtgaagagtcagagactatagaccgtgaacaagaaaagaca
gcatctaaccatccatcaatagaccatctagaagaacctacccttcagaagaggactgca
agtattgtcagtgtagtatctaacaccatggaagagctagaagaagctcaccagaagtgc
ccaccctggtggtacaagtttgcctacaaattcctgatctgggactgctgtattttgtgg
gttaaatttaaggaaatagttaaatttatagtgatggatccatttgtggacctggggatc
acgatctgtattatattaaacacaatgttcatggctatggaacattatcccatgacacca
caatttgagaacgtgctgtctataggaaatctggtgtttacaggaatcttcactgcagag
atggtctttaaaatcattgctttggatccatactactatttccagataggctggaacatc
tttgatagcattattgtcacgttgagcttggttgagttgggactggctaatgtgcagggc
ctctctgtgctcaggtcattccgtctgttgagagtgttcaaactcgccaagtcctggcca
acgttgaatatgctgattaagattattggcaattctgtgggagccctgggaaacctcacc
ttggtcctcgctattatagtcttcatatttgctgtggtgggaatgcagctatttgggaaa
aactacaaggattgcgtctgtaagatctcgtctgactgcgtcctgccacgctggcacatg
accgacttcttccatgcttttttgattgtgttcaggatcctatgtggggaatggattgaa
acaatgtgggactgcatggaggtggcagggcaaccactctgctttattgtatttatgatg
gtcatggtgattgggaacctggtggtattaaacctcttcttagccttgctgctcagctct
ttcagcgctgacaatctttcagcctctgatgatgataatgagatgaacaatctccagatt
gctattaacagaattaccagaggggtggacttcattaaaagcctaccggttaggcttctt
caaggaataagaagaacagataatgaggatgatgatcaaaagaaagaggactatgtctta
aaccacatggaccctgtaccagagtcaaagtcagactttaaacctgttgacggggtggct
agtaaagagccgcatctagcagatgaagtggaccaaatgagttttatggacaatcccagc
attgctgtccgagtacctatagctgctgcagagtctgatttggaaatcgctgatgaggag
atgacctctgaatctgagactgaggatgtcaaaaagaaagaaagtgatataggttcttct
agatgtagcacagcagactatcaagctccagaggtagttgaggaagtggtggcagaagaa
gagcctgagaatgaagacccagagccatgttttactgaaggatgtatccgccgatgcccg
tgtcttactgttgacattacacagggctctggaaaattatggtggactcttcggaaaact
tgctttaagattgttgagcacaactggtttgagactttcatcatcttcatgattctgctc
agcagtggtgccctggcatttgaagacgtatatattgagaggagaagagttgttaaaatc
atcctggaatatgctgacaaggtcttcacctatgtgtttgttgtggaaatgcttctgaaa
tggactgcttatggttttaaaacatactttaccaatgcttggtgttggctagactttctg
attgtggatgtctcccttattagtctcacagcaaactggatgggttattctgaattggga
cctattaaatcactccgaacactaagggctttgagacctttgagagcattatcccgattt
gaaggcatgagggtggttgtaaatgctctccttggtgccatcccatccattatgaatgtg
cttctagtctgtctcatcttctggctgatctttagtatcatgggtgtaaacctgtttgca
gggaagttctacaggtgtgttaatactacaactggtgagctgttcgatgtcagcatggtc
aacaacaaatctgattgcttttcattgtacgatactggagaggttaggtggatgaatgtc
aaagtcaactttgacaatgtaggattcggatacctctctctgctacaagtggctaccttc
aagggttggatggagataatgtatgcagctgttgattctcgtgaggtagaagaacagcca
tcatatgaaattaatctgtacatgtatctttactttgttatcttcattatctttggagct
ttcttcactcttaacctcttcatcggtgtcatcattgacaactttaatcaacaaaagaaa
aagtttggaggaaaggatatcttcatgactgaggaacagaagaagtactacaatgctatg
aaaaagcttggttcaaagaagccacaaaaacccatcccaagaccacagaacaagatccaa
ggagtagtgtttgactttgtttccaagcaagcatttgatatttttatcatggtactgatt
tgtctaaacatggtgaccatgatgattgaaactgatgaccaaagtgcagaaaaagaagaa
attctctactgggtcaacttggttttcatcgttgtctttacgggagagtgtatccttaaa
attattgcattgagacactactatttcaccatgggttggaatatttttgactttgttgtg
gtgattctctctgttgtaggtattatgctagcagacatcattgagaaatattttgtctct
ccaactctgttcagagtgatcagattagcaaggattggtcgtattctccgacttatcaaa
ggagcaaaaggtatcaggactttgctctttgccttaatgatgtctcttcctgctctgttt
aacattggtcttctgcttttcctggttatgttcatctattccatttttggaatgtccaat
tttgcctatgtgaagagggaggcaggtattgatgatatatttaattttgaaacatttgga
aacagtattatttgtttatttcaaatcaccacgtctgctggttgggatggtctcctttct
ccaattttaaacagtgggccccctgactgtgacccaactatagaaaatccaggaactgat
gtaaaaggtgactgtgggaacccatcagtgggtattgtttttttctgcagctatatcata
atctctttcctgattgtagtcaacatgtacattgcaattatcttagagaattttaatgtg
gctacagaagaaagtgcagagcccctttgtgaggatgactttgagatgttttatgagact
tgggaaaaatttgacccagatgccacacaatttattgattattgcaagttgtctgatttt
gtagacacattgcaagacccgttgaaaattcctaaacctaaccgaatcaagttgattact
atggacttaccaatggttgcaggggacaaaatccactgtctggatattttgtttgctctg
actaaagaagtattgggtgattctggagaaatggatgctctcaaacaaactatggaagag
aagtttatggctgcaaatccatcaaaagtatcttatgaacccattaccagcaccttgaag
agaaggcatgaagaagtgtctgtgaccatcattcagcgggcctataggaggcatttgttt
atgcgttctgtaaagcaagcatcttacatgtatcggcaaaatgaagagtgctcccctgat
gaagaggctccagaaaaagaaggattaattgctactaaaatgaaagcattctatggaaaa
ggtaatgaaacagaggaagaaatgccagcctcagcaccaagaactggaacttcacccagt
gaggataaagactgggatgaaaaaggcaatgttcgtgaatctattgtataa
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integrated database retrieval system
