Latimeria chalumnae (coelacanth): 102367021
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Entry
102367021 CDS
T02913
Symbol
LGI1
Name
(RefSeq) leucine rich glioma inactivated 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
102367021 (LGI1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
LRR_9
DUF2671
DUF7448
Motif
Other DBs
NCBI-GeneID:
102367021
NCBI-ProteinID:
XP_005991622
Ensembl:
ENSLACG00000017039
LinkDB
All DBs
Position
Un
AA seq
543 aa
AA seq
DB search
MANASKTVQRVACLLWLAYLLLLTEGRRGRQPKCPSGCSCTKDNALCENTRSVPRSFPPD
VVSLSFVKSGFSEISEGSFLHTPSLQLLLFTSNNFDSIGDDAFIGLPQLEYLFIENNKIQ
SISRNAFRGLKSLIHLSLANNNLQTLTKGLFKGLDALTTVDLRGNSFHCDCKLKWLVEWL
YSTNATVEQIYCASPPEYQGHKINDLSPKEFDCITTEFAVYQSLPFQSLSVDSFYYTNDN
HVVIAQPFTGNCNFLEWNPVEMVFRNYDNITGTSTVVCKPMVIDSQLFIIVAQLFGGSYI
YKRETFANKFIRIQDIEALKIRKPNDIETFKIDVDWYFVIADSSKAGLTTVYKWNGNGFY
SHQSLHSWYRDTDVEFLEIANKPHLILSSSSQRPVIYQWNKGQKEFVRRTDIPEMEDVYA
VKHFKVKDDVFICLTRFIGDSKVMKWEGSMFSELQRMPSRGSLVFQPLRINNRQYAVLGS
DYSFTQVYRWDVEKGKFVKFQELNIQAPRAFTLFSTGNHDFLFVSSFKGTTQIYKHVIID
LSA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgccagcaaaaccgtccaaagagtcgcctgtttgctttggctggcatatctg
cttttgctgactgaaggaaggagaggcaggcagccgaaatgtccaagcggctgttcttgc
accaaagataatgcgctctgtgaaaacaccagatcggttcctcgcagttttcctcctgac
gttgtttctttgtcgtttgtgaaatctggtttctccgaaatctcagaagggagtttcttg
catacaccttcactgcagcttcttttgtttacctcaaacaattttgattctattggggat
gatgccttcattggtcttcctcagcttgaatatctatttattgagaacaacaaaatccag
tcaatttcaagaaatgcatttcgtggcctaaaatccttgattcatttgagcctggcaaat
aataaccttcaaaccctaactaaaggtctttttaaaggcctggatgctttaaccactgtg
gatctcagagggaattcatttcattgtgactgcaaactgaaatggctggtggagtggcta
tatagtaccaatgctacagttgaacaaatctactgcgcaagtccaccagaatatcagggg
cataaaatcaatgacttgtcacccaaagaatttgactgcataactacagaattcgcagtt
tatcagtcccttccctttcagtctctttcagtcgatagcttttattacacaaatgataat
catgttgtaattgcacaacctttcactggaaattgtaacttccttgaatggaatcctgtg
gaaatggttttcaggaactatgacaacattacaggcacatcaactgtggtctgtaagcca
atggttattgatagtcagctttttattattgttgctcagctgtttggaggctcttatatt
tacaaaagggagacctttgctaacaagttcataagaatccaggacattgaggctcttaaa
ataagaaaacccaatgacattgaaacttttaaaattgatgtcgattggtactttgttatc
gcagatagttcaaaggctggactaacaactgtttacaagtggaatggaaatggattttat
tcccaccagtcccttcactcttggtatagggacactgatgttgaatttcttgaaatagca
aacaaacctcatttaattctctccagcagttcccagcgacctgtgatttatcagtggaac
aaagggcagaaagagtttgtcaggcgcaccgatattccagaaatggaggatgtgtatgct
gtgaagcactttaaagtcaaggatgatgtgttcatttgcttaacaaggtttattggagat
tctaaggtaatgaagtgggaaggttcaatgttttcagaattacaaagaatgccatctcgg
ggatctctggtattccaacctcttagaataaacaacaggcagtatgcagttcttggaagt
gactactcttttactcaagtctaccgctgggatgtggagaaaggaaaatttgtaaaattc
caagaattaaatattcaggctccaagagcttttacacttttttccacaggtaatcatgat
tttctgtttgtctcaagttttaagggaactacacaaatttataaacatgttattattgac
ttaagtgcatga
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