KEGG   Latimeria chalumnae (coelacanth): 102367071
Entry
102367071         CDS       T02913                                 
Symbol
SNU13
Name
(RefSeq) SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03008  Ribosome biogenesis in eukaryotes
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102367071 (SNU13)
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102367071 (SNU13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102367071 (SNU13)
   03009 Ribosome biogenesis [BR:lcm03009]
    102367071 (SNU13)
Spliceosome [BR:lcm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    102367071 (SNU13)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    102367071 (SNU13)
SSDB
Motif
Pfam: Ribosomal_L7Ae PELOTA_1
Other DBs
NCBI-GeneID: 102367071
NCBI-ProteinID: XP_006004669
Ensembl: ENSLACG00000008587
UniProt: H3AJB7
LinkDB
Position
Un
AA seq 135 aa
MLQQSSAAVEQEVNPKAYPLADAQLSKTILDLVQQASNYKQLRKGANEATKTLNRGLAEF
IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLK
PQIQSIQQAIERLLV
NT seq 408 nt   +upstreamnt  +downstreamnt
atgttacaacaatctagcgccgctgtggagcaagaagtaaacccaaaagcttaccccctt
gctgatgctcagctgagcaaaaccattttggatctggttcagcaagcttccaactataag
cagctcagaaaaggtgcaaatgaagctacaaaaacactgaacagaggacttgctgaattc
attgtgatggcagcagatgctgaacctttagagatcattcttcatttacctctcctttgt
gaagataagaatgtgccttatgtgtttgtaaggtccaagcaggctcttggacgtgcgtgt
ggcgtctccagaccagttattgccacatctgtgactattaaggaaggatcccagttgaaa
cctcagattcagtctattcaacaagcaattgagcgtttattggtctaa

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