Larimichthys crocea (large yellow croaker): 104918121
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Entry
104918121 CDS
T04659
Symbol
cacna2d1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104918121 (cacna2d1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104918121 (cacna2d1)
04261 Adrenergic signaling in cardiomyocytes
104918121 (cacna2d1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104918121 (cacna2d1)
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104918121 (cacna2d1)
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Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
DUF2201
MCP-like_PDC_1
Motif
Other DBs
NCBI-GeneID:
104918121
NCBI-ProteinID:
XP_019128917
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Position
XXI:19228518..19286163
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AA seq
1084 aa
AA seq
DB search
MDTCRVRAWVFLVLLWQDGSLASQFPTQLMIKEWVDQMQKELVTLADTATAGKSLTEIFQ
RNRHLYTVEQNDAEELVARAATKIEQLLRKRSAALEKLATAAENFQMEYQWKDEFEDDEI
AYYNAKDNLDANETEGRKYRIRPDFKEDPSFKRLTDHNHTAVHIPTDIYDGSTIVLNELN
WTEALEEVFRKNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNTRVKKTACF
DHLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFEQLSATNVSRANCNKIIMLFTDG
GEERAQAILQKYNADKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADKQAKQVQWTNVYLDALELGLVITGTLPVFNKTKTKDDRNGEHQNQL
ILGVMGIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDLL
DAELENDIKVEIRRMMIDGETGERTIHTLVKTQDERYIDRGVRTYTWGPVNGTDYSLALA
LPKYSEHFIQAKLGDDMKQAMSSSWGQEAMQTIQLERFDEFGYTYIAPREYCKELKLSLN
NTQFLLDFSQYIDRNTPDACNVSLVSRLILDAGLTAELVKLWNEQTVDGIVARFVATDGG
ITRVFPRSAGEEWTENSETYESSFYKRTLDNEIYIFTAPSFNTESREPVSESGILVSKAV
DLTIDEVTLKPAVVGVKLNVSFWMNSFMNATLKLNCKDEICGCLKNDKHVDCVILDDGGF
LLMSNQDEYINLIGQFFGEVDPVLMINLVNTSLYSFNKTYDYQSVCDPERDSKAAAGPRS
VYVPTIADLLSIGWWASSAAWSILQQLFYGLMFPSLLEAAELADEEIPDAMFKESCITEQ
TQYFFDNDERSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKATCLSCDPRPLRQAEQP
SEGPDPCELAQNPRYRKGPDVCFDNDENEDDSDCGGGTCLTPCLWPMLGLQLLLLWLITS
LQHS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgcagggtacgagcctgggtgtttctggtcctgttatggcaggacgggtct
ttggcatcgcagttccctacacagctcatgattaaagaatgggttgatcagatgcagaaa
gagcttgtcaccctggcagacacagccacagctgggaaaagcctcactgagatttttcag
agaaaccgacacctgtacactgtggagcaaaacgacgcagaggagctggtggccagagca
gccacaaaaattgaacagctgctgcggaagaggtctgcagccttggagaaactggctaca
gctgctgagaacttccagatggagtatcagtggaaagacgagtttgaggatgatgaaatc
gcctactacaacgcaaaggacaatctggatgcaaatgagacagaaggaaggaagtacagg
attcgaccagactttaaagaggacccgtcatttaaacgtttgactgatcacaaccacacg
gctgtccacatccccactgacatctatgatggctccactattgtgctgaatgagctcaac
tggacggaggcattggaggaagtgtttagaaagaacagagaggatgatccaacccttctc
tggcaggtgtttggtagcgctactggcctagctcgctactacccagcctccccctggatg
gatgcccgtaagacccccagtaaaattgacctgtatgacgtccgcaggaggccatggtac
attcaaggagccgcctcacccaaagatatgctaatccttgtggatgcaagcgggagcgtg
tctggcttgactctcaaactgatcaggacctccgtcagtgagatgctggagactctgtct
gatgatgactacgtcaatgtggtttattttaacaccagggtgaagaagacggcgtgtttc
gaccatctggttcaggccaacgtgaggaacaagaagctgcttaaggatgctgtacagaat
atcacagctaaaggaattacaaactacacaaagggctttgagtttgcttttgagcaactc
tctgcgactaatgtgagcagagcaaactgcaacaagatcatcatgctttttactgatgga
ggagaggaaagagctcaggccatactgcagaagtacaatgctgacaaaaaggtgaggatc
ttcaccttctcagtaggacagcacaactatgataaaggacccattcaatggatggcctgt
tccaacaaaggttacttctatgagattccttccatcggagccatcagaataaacacacag
gagtacttggatgtcctgggaaggccaatggtcctagcagacaagcaggccaaacaagtc
cagtggactaatgtataccttgatgctctggaactgggtcttgtcatcacaggaacactg
cctgtcttcaataaaacaaagaccaaagatgacaggaatggcgagcaccagaatcagttg
attcttggcgtaatggggattgacgtgtctctggatgacatcaagaagctcacaccacgc
ttcacaattggtccaaatggatactactttgccattgatcctaatggatatgtcctgctg
caccccaatcttcagccaaagaatcctaaattccaggaacctgttaccctagacctcctg
gatgcggagctggagaatgacatcaaagtggagatcaggagaatgatgattgatggtgag
acaggtgaacggaccattcacactctagtgaaaactcaggatgagaggtacatagatcga
ggagtcaggacctacacatggggtccagtcaatggtacagattacagcctggctcttgct
ctgcctaaatacagtgaacacttcatccaagctaaactgggggatgatatgaaacaagct
atgtcttcttcttgggggcaagaagccatgcaaaccattcagctggagaggtttgatgag
tttggttacacctacatcgctccaagggagtactgcaaagagctgaagttgtcactcaac
aacactcagtttctcctcgacttcagccagtacattgacagaaacactccagatgcatgt
aatgtgtctctggtgagtcgactaatcctggatgcaggcctgacagctgaactggttaaa
ctttggaatgagcagacagtggatgggatagtggccaggtttgtagccacagatggagga
atcacaagagtcttcccaagaagtgctggggaagagtggactgaaaattctgagacatat
gagtccagcttctacaaaaggaccctcgacaatgaaatttatattttcacagctccgtct
ttcaacacagagagcagggagcctgtttctgagtcaggcattctcgtgagcaaagcagtg
gacctcacaatcgacgaagtcacacttaaaccagcagtggtgggagtgaaactcaatgtc
tcattctggatgaacagtttcatgaatgctacactgaaactgaattgcaaagatgagatc
tgtggctgcctgaagaatgacaagcatgtggactgtgtgatcctggacgatgggggattt
cttctcatgtccaatcaggatgagtatatcaacctgataggtcagttctttggtgaggtg
gatcctgtgctaatgatcaatctggtcaacacctccctatactccttcaacaagacctat
gactaccagtctgtctgcgacccagagagagacagcaaagctgcagcaggaccgcgctct
gtctatgttcctaccattgctgacttgctcagtatcggctggtgggcctccagtgctgcc
tggtcgatactccaacagctcttctatggtctcatgtttcccagccttctagaggcagcg
gagttagcagatgaagaaataccagatgctatgtttaaggaaagctgtatcacagagcag
actcagtatttctttgacaacgatgaaagatcttactcaggtgtcctggactgtggaaac
tgttccaggatgtatcgtgccgagaagctgccaaacaccaacctagtgttcctgatcact
gatgccaaggcaacatgtttgtcgtgtgaccccagaccgctacgacaggctgaacaaccc
tctgaaggtccggatccatgcgagctggctcagaatcccagataccgcaaagggccagat
gtatgttttgacaacgatgaaaacgaagatgattctgattgtggaggagggacctgtcta
accccgtgtctttggccaatgcttgggctccaactactgctgctttggctcatcacatct
ttacaacactcatga
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