Larimichthys crocea (large yellow croaker): 104918385
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Entry
104918385 CDS
T04659
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104918385
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
104918385
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Nipped-B_C
ARM_UBP24_USP9X-Y
ARM_LRRK2
Motif
Other DBs
NCBI-GeneID:
104918385
NCBI-ProteinID:
XP_027135336
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Position
VI:6896072..6907684
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AA seq
792 aa
AA seq
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MLYDGNGIVFQLSQQCQGWAGQGALILCTSDNTPQLTGFPYEQSPPLDVVVGATWTAGKK
RKKKMTNQYPLKSVISITSVDDTSLALPSVNQYRSGQQRVLEQVQTIRRTKSRQSSSSRS
LSTSLSPTSPVYDSVFSDASKSQSSTSNGTVFFGNGFSKALNLEKNTTRQPINNIKGSPV
KRNTFSTYQQERSHATGGAMRFGQANTSRSEPDSAWQRTKRSVAGQRFHSNRPTFKAERP
TSMFVVSPTTQTPLFQSQFSVNGIGQTKINTQFGLSKVDSSKQSSKPPVTESGLKGKEDS
GSNGNTGVADITMKEAVEYLTNKDETYQHCGASYIQHNTFIDDNAKEELLKLNGIPALVA
LLRSSSQQVHQTASAALRNLSFKSNNSKEQISRCGGITEAVTLLRDTDSAEIQKQLTGLL
WNLSSVDSLKPDLLKSALPVLMERVILPYTTGPDRTNNDHDAFFHATGCLRNLSSAKQNN
RQAMRKCRGLIDSLVKYLQDCVEAGKPDDKPVENCACILHNLTFQLEDEAPALFGRITAL
AKPVNRNNSQGDAGPIGCFSPQSKQLEQECHFDFPVVEDPLPSGAGWLIHSKTLQSYLSL
LGSSQQEETQEACCGALQNLTTNEGIVSGVMSQIIVQKLNGLKTISPLLKSNKVNLQRNV
VALVRNLTKNPNLHNNIARKALPELLATLSEGTKKGNESDDTLAMACQTANCLFMKDPEI
GKPLLNYNLINSLNELSKNGYLPKSRKAAALLLYNLWSEKDLQSFLKKQGMVKSFFVNDV
TMAAHKSVQVVD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgatggtaatggcatcgttttccagctctcgcagcagtgtcagggctgggca
gggcaaggtgcgcttatcctgtgcacttcagacaacactccgcagctgactggtttcccg
tacgagcagagccctcctttggatgttgttgttggggccacctggacagctggaaagaaa
agaaaaaaaaaaatgacgaaccagtatccgctgaaatccgtcatttccatcacgagtgtg
gacgacacgtcgttggctttgccctcagtgaaccagtatcgatctggacagcagcgcgtc
ctcgaacaagtgcaaaccatcaggaggaccaaatccaggcagtccagcagcagcaggagt
ttatctacttctttgtctccaacaagccctgtatatgactcagtgttcagtgatgcctca
aagtcacagtcgagcacatctaatggaactgtcttctttgggaatggcttttctaaagcg
ctcaacctagaaaaaaacaccacccgtcaaccaatcaacaacataaagggttcccctgtg
aagaggaacacattttctacctatcaacaagagaggagtcacgccaccggtggcgccatg
cggtttggtcaagccaacaccagccgcagcgagcctgattcagcctggcagcgcaccaaa
cgctctgttgctgggcagaggttccattccaacaggcccaccttcaaggcagaaagaccc
accagtatgtttgtagtgagccccacaacccagactcctctctttcagtctcaattcagt
gttaatggcataggccagaccaaaataaatacccagtttggattgagcaaagttgattct
tccaaacaatcctcaaagcctcctgttacagagagtggtctgaagggaaaagaagattct
gggtcaaatgggaacactggagttgctgatatcactatgaaagaggctgtggagtacctt
accaacaaggacgaaacctatcagcactgcggtgcttcctacatacagcacaacactttt
attgacgataatgccaaagaggagttgttgaaactcaatgggatccctgcgttggtggct
ttgctgcgcagctccagtcagcaggtccaccagacagcctcggccgccctacgtaacctg
tccttcaaaagcaacaatagcaaggagcagatcagtcgctgcggtggcatcacagaggct
gtgactctgctcagagacacagactctgcagagatacagaaacagctgacaggtctcctg
tggaatttgtcctctgtcgacagcctgaagccagacctgctgaagagtgctttgcctgtc
ttaatggagcgtgtgatcctgccttacacaacaggtcctgaccggactaacaatgatcat
gatgccttcttccatgccaccgggtgtctaagaaacctgagcagtgcaaagcaaaacaac
agacaggcgatgaggaaatgtcgaggtttgatcgactctctggtcaaatatcttcaagac
tgcgtggaagcaggaaaacctgatgataagcctgtagaaaactgcgcctgcatcctgcac
aacctgacgttccagctagaggacgaggctccggctctttttggaaggatcacagctttg
gccaaacctgtcaacaggaacaacagccagggtgacgccgggcccatcggctgcttcagc
ccacagagcaaacaactagaacaggagtgccactttgatttcccggttgttgaggatcca
ctgccaagtggtgcaggctggctgattcactccaaaactctgcagagttacctgtctttg
cttggctccagccagcaagaagaaacacaggaagcctgttgtggagcgttacagaacctc
accacaaatgaaggcattgtctccggtgtaatgagccagataattgtgcagaaactgaat
ggcctgaaaaccatcagtccccttttaaagtcaaacaaagtcaatctgcagaggaacgta
gtggctttggtaagaaacctgaccaagaacccaaatctgcacaataatatagctcgtaaa
gctctcccagagctgctggccaccctgagtgaaggcaccaagaaaggaaatgagtctgat
gacacactggccatggcctgccaaaccgccaactgcctgtttatgaaggaccccgagata
ggaaagcccctgttgaactacaacttgataaactcactaaatgagctcagcaaaaacggg
tatctccccaaatccaggaaagccgcagctctgcttctttacaacctctggtcagaaaag
gacttgcaaagcttcctgaaaaaacaagggatggttaagtccttctttgtgaatgatgtc
accatggcggcacacaagtcggttcaagttgtcgattaa
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