Larimichthys crocea (large yellow croaker): 104918796
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Entry
104918796 CDS
T04659
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104918796
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104918796
04261 Adrenergic signaling in cardiomyocytes
104918796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104918796
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104918796
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
DUF2201
Cache_3-Cache_2
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
104918796
NCBI-ProteinID:
XP_019122324
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Position
XX:complement(7780690..7865372)
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AA seq
1089 aa
AA seq
DB search
MDYSICLLLLLSTISSVSVGQFPTSKIIKDWVDQMQKELITLTDTASGMQHLIQIYHKHS
PHFTVETNNAIELVATAAGNIERLLANRSEALKRLASEAERYQMEHDWMRYDSEDEKIVY
YNAKEDLNQTEEAKRENKRYIPDDFDIDPDFKRLVSYNTTAVHIPTDIYERSTIILNELN
WTEALEDVFRKNKEEDPSLLWQVFGSATGLARYYPASPWINSSNSADKIDLYDVRMRPWY
IQGAASPKDMLILVDASGSISGLTLKLIRTSVSKMLETLSDDDYVNVVYFNDQARYASCF
ENLVQANVRNKKKLKEAVQEITAKGITNYRSGFELAFKQLAQMNVSRANCNKIIMLFTDG
GEEKAEEIFKKYNPNQAVRIFTFSVGQHNYDKGPIQWMACANKGYYYEIPSIGAIRINTQ
EYLDVLGRPMVKESKKAKQVQWTNVYLDALELGLVITGTLPVFNKTNTGSKKAQKFQNQL
ILGVMAIDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLTAKFDEPVTLDFL
DAELESDIKVEIRKQMIDGNHGNYTISTLVKSQDERYIDLTQRTYTFAPVKGTDYSLALV
LPEYSKHYIQANIGDTITQAKSFVGKNVSESLLADKFDEYGYTFIAPRVYCKDLKPPEKD
KNNTEFLMEFNNYIDTKTPNHPLCNVELVNRLLLDAGITSELIKIWKKKDLQHGVLARFV
ATDGGITRVYPKSAGLSWKVEAETYESSVYKRSLDNDLYIFTPTPYPKENSSDDSVLVSR
AVNININDITLKPAVVGVKLDISAWMASFINTTQRMNCNDEICGCQRNHPYVDCVILDDG
GFLVMSNQDDDISQIGNFFGVIDPILMRNLVNSSLFTSKKTFDYQSLCDPKKKSKVAAGP
RSVYVPTIADILNVGWWATAAAWSVLQQLLVSITFPNFLDAAEMDDELPEAMRKEVCTTE
QTQYYFETNQLTFRGNIDCENCTRMYHAEKLPKTNLVFIIADAKPTCSSCDTKPLIQDEQ
PSDGPNPCERAQNPRYRKGPAACFDNTEHEQDPDCGGVSGLAPSLWLMLALQLVLLWVLT
GSRHHAIPS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggattactcaatatgcctacttttactcctgtcaaccatttcgtctgtgtcggtcgga
caattcccaacatcgaagataataaaagactgggtggaccagatgcaaaaagagttgatc
acattaacagacacagccagtggtatgcagcacctaatacagatatatcataaacacagt
cctcacttcaccgttgagaccaacaatgcgattgaactggtggcgacggctgctgggaat
atcgagaggctgctggctaaccgctccgaagccctaaagaggctggcgtcagaagcagaa
aggtatcaaatggagcacgattggatgaggtacgacagcgaggacgaaaaaatcgtttac
tacaatgccaaagaggaccttaaccagacggaggaagcaaaaagagaaaataaacgatat
attccagatgatttcgacatagaccctgacttcaaacgactcgtttcctacaacaccact
gccgtccacatccctacggatatatatgaacgctctaccatcattttgaatgagctaaat
tggacagaggccttggaggacgttttccggaaaaacaaagaggaagatccgtcactcctt
tggcaggtgtttggctctgctaccggattggctcggtactacccagcatccccttggatc
aactcgagcaactccgccgataagattgacctctacgatgtgcgcatgcgaccgtggtac
attcagggggcggcgtcaccgaaggacatgctgatcctggtggatgcgagtggcagcatt
tcgggtctcaccctcaaactcatccggacgtcagtcagcaagatgctggagactctctct
gacgacgactacgtgaacgtggtctattttaatgaccaggccaggtacgcatcgtgcttt
gagaacctggtgcaggccaacgtccgcaacaagaagaagctgaaagaggccgtgcaggaa
atcaccgccaagggtatcaccaactacagaagcggctttgagctggccttcaagcagctt
gcacagatgaacgtgtcaagggccaactgtaacaagatcattatgctcttcaccgacgga
ggagaagaaaaggcagaagagatctttaaaaaatacaaccccaatcaagcggtgcgcatc
tttacgttttcagtcggtcaacacaactacgacaaaggaccaatacagtggatggcctgc
gctaataaagggtactactatgagatcccatctataggtgcaatcaggatcaacactcag
gaatacctggatgttttgggcaggcctatggtcaaggaaagcaaaaaggccaagcaggtt
cagtggaccaacgtctacctggatgcactggagcttggcctggtgatcactggaactctg
cccgtcttcaacaagaccaacacgggctcaaagaaagctcagaagtttcagaaccagctc
atcttgggagtgatggctattgatgtctccctggaagatatcaagagattgacccctcgg
tttacttttggaccaaatggctactactttgccattgaccccaatggatatgtgctgctc
caccccaatctccaaccactgactgccaagttcgatgaacctgtgacgctggactttctg
gacgcagagctggagagtgacatcaaagtggagatacgaaaacaaatgattgacggaaat
cacggcaattacacaatatctacattggtgaaatcccaagatgagcgctacattgactta
actcagaggacgtacacctttgcaccagtgaaggggactgattacagcctggctctggtc
cttcctgagtacagtaagcattatatccaggccaacatcggcgacacaatcacccaggca
aaatcgtttgtggggaaaaatgtttctgaaagcctgctggcggacaagtttgatgaatat
ggctatacctttattgcaccgagagtgtactgcaaggacttaaagccacctgaaaaggac
aaaaacaacacagagttcctcatggagttcaacaattacattgacaccaagactccaaac
catcccttgtgtaatgtggagttggtgaaccgattgctcctggatgctggcatcacgtca
gaactgatcaagatttggaaaaaaaaagacttgcagcatggtgtcttggccagatttgtt
gccaccgatggagggatcacacgggtctaccccaaaagtgctgggctgtcctggaaagtg
gaagcagagacatatgagtcaagtgtctataagcgtagtttggacaatgatctgtacatc
ttcactccaactccctaccctaaagagaactcaagtgacgactcagtcctggtgagcaga
gcagtaaacatcaacattaatgatatcacactcaaaccagctgtggtcggcgtgaagttg
gacattagtgcctggatggcgagcttcatcaacaccacacagaggatgaattgcaatgat
gagatctgcggctgccagcggaaccatccgtatgtagattgcgtcattctggatgacggg
ggtttcctggtgatgtctaatcaagatgacgatattagtcagattgggaatttctttggc
gttatcgacccaatcctcatgagaaaccttgtcaactcgtccctgttcacctctaaaaag
accttcgactaccagtcgctctgtgaccccaagaaaaagagcaaggtggctgcaggaccg
cgatccgtctacgtgcctacgattgcagatattctcaatgtaggatggtgggcgacagct
gcagcctggtcagtgctgcaacagttactggtcagcatcacattccccaatttcctggac
gcagccgagatggatgatgaattgccagaagccatgcgtaaagaggtctgcaccacagag
caaactcaatactactttgagaccaaccagctgactttcaggggcaacatcgactgtgaa
aactgcaccaggatgtaccatgctgaaaagctgcccaagacgaacctggtctttatcatt
gctgatgcaaaacccacctgctcatcctgtgacaccaagccgttaatacaggatgaacag
ccgtctgatggtcctaatccatgtgaacgggctcaaaatccacggtacaggaaaggaccc
gcagcctgttttgataacactgaacacgagcaggaccccgactgtggtggtgtgtccggc
ctggccccctcactttggctaatgttggcccttcagctggtgctcctctgggttttgact
ggttccagacaccacgccatcccgtcatga
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