Larimichthys crocea (large yellow croaker): 104918961
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Entry
104918961 CDS
T04659
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104918961 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104918961 (trim37)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104918961 (trim37)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104918961 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
HlyD_2
zf-C3HC4_2
MRFAP1
PIN_8
BORCS6
Motif
Other DBs
NCBI-GeneID:
104918961
NCBI-ProteinID:
XP_019121325
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All DBs
Position
XXII:19887165..19907802
Genome browser
AA seq
959 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCSLTKHEDNDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLVEIYEQHVTKVKEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLHSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLVNFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSGYIQQINNLKERLAIELFRRQTSRSSSPPDMRLAAGTTASERDPRSVKSDDDI
QTTLSNTKKGEEEGERTQHDDSNELSDGDLEVDCLTEEEVNPLDGSSTSGSSTATSNTEE
NDIDEETMSGENDVDFIGNLETEEGELPDDLAGATGGSSSSVRSLHRSAAAAAAAAAGRS
VSGSGAAAGGAVGPGNNSLLEIDPVILIQLLDLKERNSVESLWGLQPRPPVSLLHSQAHP
HSRKERERRPQVVRRSAPDSGVLIRLKAQMAEVRSKMSDVKSQVLDARGAGEPRPGTSGG
FGAEEVPSHHADSELSACRKPGELDLLGRAAAGRSRPCRPARKSLSPVLDSGGSLVMKRR
SPEEMEKDLRGADVASELSLHLKEVLGGAEGVLKTDGTQGPLVSLSGSSSEQASTSKQQY
SMEQQLYGASGSRDDIFSLGGPSYLTASKNCGSRTLGAAMLDCESESSGNSHQSLLEGPS
AQPQSNEDKSPSVLVAATSSDSDTEDEALQSNNSRYDNQTPPCTGEQLLSDDMSLPADR
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagagtgttgagagcatcgccgaggtgtttcgctgcttcatttgtatggag
aagctgagggatgctcgtctctgcccgcactgctccaaactctgctgctttagctgcata
cgacgatggttgacagagcagagagcccagtgtccacactgccgggctccactccaactt
agggagctggtcaactgtcgttgggcagaggaggtcacccagcagctggacaccctgcag
ctctgcagcctcaccaagcatgaggacaacgacaaggacaaatgtgagaaccaccacgag
aagctgagtgttttttgttggacctgtaagaaatgcatctgtcaccagtgtgctctgtgg
ggaggcatgcatggtggccacaccttcaagcctctggtggagatctacgagcagcatgtg
actaaagtgaaggaagaggttgccaagctccgccgacgcctcatggagctcatcagtctg
gtgcaagaagtggagaggaacgtggaggctgtcaggggagcgaaggacgagagggtcaga
gagatccgaaacgctgtggaaatgatgatcgcccgtctggacaatcagctgaagaacaaa
ctcatcaccctcatgggccagaagacgtccttgacccaggagacggagctgctggagtct
ctcctgcaggaagtggagcatcagctccactcctgtagtaagagtgaactgatctccaag
agtccagagatcttgctcatgttccagcaggtccatcggaaacccatgcaatctttcgtc
actacgccggtccctccagacttcaccagtgagctggttcctgcctacgactcaagcact
tttgttctggtcaacttcagcaccctgaggcagcgggccgaccctgtctacagccctcct
ctacagatatctgggctctgctggagactcaaagtctacccagatggaaatggtgtggtc
cgtggaaactacctgtctgtcttcttggaactgtctgctggactccctgaaacatcaaag
tatgagtaccgtgtggagatggtccatcaggcctccagtgacccaaccaagaacatcatt
cgtgagtttgcctctgactttgaggttggtgaatgctggggctacaaccgcttcttcaga
ctggatcttctggccagcgagggctacctgaacatgcagaccgacacattggtccttcgc
taccaggttcgctcgcccacattcttccagaagtgcagggatcagtactggtacatcagc
cagctggagtctgcccagagtgggtacatccagcagatcaacaacctcaaagagaggttg
gccattgagctgtttcgccgtcagacctcacgcagctcctcaccccctgatatgcggctc
gctgcaggtaccacagcctccgaaagagaccctcgctctgtgaagagcgatgacgacatc
cagaccacattgagcaacactaaaaaaggcgaagaagaaggagagaggacccagcacgat
gactccaatgagctgtcagacggtgacttggaggtagactgtctgacagaggaggaggtg
aacccgctggatggcagcagcacctcagggagctccacggccaccagcaacacagaggag
aacgacatagatgaagagaccatgtcaggagagaatgatgtagactttattgggaacctg
gagacagaagaaggagagcttcctgatgacttggctggagccacaggtggatccagctcc
agtgtgcgttccttacatcgcagcgctgctgctgctgctgctgctgctgctggtcgcagt
gtcagtggtagcggagctgctgctggtggtgctgttggtccaggcaacaacagcctcctg
gagatcgatccggtcatcctgatccagctgctggatttaaaggagcgcaacagcgtggag
tctctgtggggtcttcagcctcggcctcctgtatctcttctgcacagccaagctcatcct
cactccaggaaagagcgagagcggcggcctcaggtggtgcgacgctcagctccggactca
ggggtcctgatacgcctcaaggctcagatggctgaggtccgcagcaagatgtcagatgtg
aagagtcaagtgctggatgcccggggggctggagagcccaggcctggcacatcggggggc
ttcggtgcggaggaggtaccctctcaccacgctgattcagagttgtcggcttgtcgtaag
cccggtgagctggacctgcttgggagagcagctgcaggtcgatccaggccttgccgccct
gccaggaaatctctctccccggtcctggacagcggtggctctctggttatgaagaggagg
agtccagaggagatggagaaggacctgagaggagcagacgtggctagtgagctcagcctg
caccttaaagaggtgctgggaggtgcagagggagtgctgaagacagacggcacccagggc
ccccttgtgtctctcagcggctcctcttcagagcaggcctccacctccaagcagcagtac
tcaatggagcagcagctgtatggggcctcagggtccagggacgacatcttctccttggga
ggacctagctacctgactgccagcaagaactgtggcagcaggaccctaggggcagccatg
ttggactgtgaatctgagagctcgggaaactcccatcagtccttgctggagggaccatct
gcacagccacagtcaaatgaagataagtctccatctgtcctggtggcagcaacaagcagt
gacagcgacactgaggacgaagccctgcagagcaacaactctcgctacgacaaccagact
cctccttgtacaggagagcagcttctgtctgacgacatgagcctgcctgctgacaggtga
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