Larimichthys crocea (large yellow croaker): 104918975
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Entry
104918975 CDS
T04659
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104918975 (ttc3)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104918975 (ttc3)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104918975 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
TPR_2
TPR_11
zf-C3HC4
zf-C3HC4_2
TPR_1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
TPR_17
TPR_16
zf-HC5HC2H
zf-RING_11
zf-RING_Vps41
TPR_8
ANAPC3
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
104918975
NCBI-ProteinID:
XP_010729172
LinkDB
All DBs
Position
XXII:complement(19969703..19990466)
Genome browser
AA seq
1792 aa
AA seq
DB search
MSDSDSDSDYGADWEAVRDKMTAKLMAASTNDTIIALRPSEEVFERWSRIAIETRAEAAQ
RMKLCAFWLPILLQREECTTTAWALQIGLIDLNDDLSLKHLHKIEVLEAIFRALEKGTLK
KDQTKHVIWISNMFNLRSPEVLEDALHWLERTGEPSIRRYIMDLGHPTTCFKALHLIFTE
FAKYIQNMGNNLEKTMKALMAQPSDYNKEKSEEMKKKGNENFTKNQYEDAVKFYSKAIKF
YPDNHIIYGNRALTYLRSQKYLKAVGDGKRAILIKPLWAKGHYRYCEALFSLGEVKRAIE
ANKLAQTLCKRDREGVKDLEQQLQKFMGEQAVIQQADGTLTVLEPNRIRTTSTHTVVDLS
GLNTGSSLRIGLVKNAPPQTKVLHGKGEKKPVKNVKNEKATLAVQSSPKVSKPLKSEVPL
KNDKKVPTTKEFSVTTKKKSKNRKRFEDEKLEESKPGVCKQFKTMVQDGYTALADHRSRN
AEQAFRQAVEFLENSKELGLSTMDVLLLHFGRVSALTDIGLPEELGQAHRLLEKMKSYEL
RTFQCLVFYAIGRVYFRENRFAVALKQFSDSLQMVKNQITPGKLTWPLTKETVKETQPDY
FKNILEEAIELCRFPPMPDAICRHEKCHGHLKAEIYFTDPDFKGFIQICCCQSCIIEYHM
TCWKTLKSTLSFDKSEKDFLQDSCLTPDCVGKICSIKIFGPTGLVKCKFEATITKPQTPK
KPKVNQKCTSLKKLKSKEERQLKRKQHKQSFQETPVIKDEILQEKEDPTTQIQQKAWLLY
RDRVLLQISQNMELLKEEKGLQVSTLTSSLKPWLELDLSRGNQIAGRILNWQEEQLESLG
QVTELLLERRNRVWARVLIQLLSSCLDINPKLNNWACQLNNSGLDAARSFIDLNAGHLEQ
LDLAFLLNFGPLQEVVIEKLGTRPELFSSIGLTVTEYLKQAPPHDMRLFIWTLEEHRDEY
VSCHTILDEYFDMMDGHCSVLKKSDETQNNSPMKSRGRKKKQKEPKGVIVLSGMRSVTQR
DEWDQEIFEDDSLSFLHPVDPFSVPSHLREQVADFEDQYNTTRHRSHYKKILDNNPDPTK
ESLYDYFDQILEEHGPLVAEDPLLVGELDNFPPVAQQKIQEAGGFESFLLESLRFIKIGR
SIGLAKHAVSLQQAGNGASLDDLDDLDDLDDLDEIGDPDTSDLHASHDPAFLSYLDGYSS
AQTEVYPILPNPYTYGALHLPVSQSATGVPLTGYGPFSHLTNGDTQQQVPFYLPNDYGDL
DLYTSEMDSEVWDDPINHPTDPSSDGVASMITDEIFSKKHAAAQTCQETMRSVAVNTEPH
EPFESCPGDLNKKEKNNETLPEEIKKISTGCDAVSLRHREELASLEEEVQKINANVQVTN
KELALFQHKLEEEVRKDQKEKKANQEVLKSLKVEIERLVEEQESLARKIREKKSKYDTKF
SDFLELSNQSAAEKMSLEDEIKRCKISVNFATRRSLTAQLSVVESSRDQALYVLYRELAN
TKAFQNKLDEAVHIFPNKDLEMTRSNCRASVQEIEKKISAAEAHYKEQIDQVKKGRRVSE
LIAVSMNELELSAAPLSVATKEIVPPPSASNVSPPLIKPLGADTPAGLTLMQHKPPIRTQ
EPPHNTVFEKAIERLATMFPDYTRPDLMRFIQELRSSSGGSLNSMELQDMVGGVTQLILD
HQEKLNAGAKLNVTGRGSPAQYGTSPYAVPVWQTLGPQRVTHSNALNVEDPCIICHEDMS
PDTICVLECRHSFHKECIKSWLKEQSTCPTCRDHALLPEDFPMLPGRRRQAL
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcagactctgactctgactatggcgctgactgggaagcggtcagagataag
atgactgcgaaactcatggcagcttcgacaaatgatacaattattgccctccgtccatca
gaggaggtttttgaacgatggagtcgtatcgctatcgaaaccagagccgaggctgcacag
cggatgaagctttgtgccttctggcttcccatcctgctgcagcgtgaagaatgcacgact
actgcttgggctttacaaataggtctaatcgacttaaatgacgatctaagtcttaagcac
cttcacaagatagaagtattggaagcaatcttcagagcgctggagaaaggaactttgaaa
aaggaccaaaccaaacatgttatctggataagcaacatgtttaacttgcgctccccagag
gttttggaggacgccttacactggttggagcgaacaggagaaccttctattcgccggtac
atcatggatctcggccatccaaccacctgcttcaaagccctgcaccttatcttcacagag
tttgctaagtatattcagaatatgggtaacaacttggagaagaccatgaaggcactgatg
gctcaaccatctgactataataaagagaaaagtgaagaaatgaaaaagaaaggaaatgag
aacttcactaaaaatcagtatgaagatgctgtgaagttttattccaaagccatcaaattt
taccctgacaaccacataatttatgggaacagagccctaacctatctccgaagtcagaaa
tatctaaaagcggttggtgatgggaaacgtgctattttgataaaacctctctgggcaaag
ggtcactaccgctactgtgaggctttgttctccttgggggaggtcaaaagagctatcgaa
gccaacaagttagctcagactttgtgtaagcgtgaccgagaaggagtcaaagatctggaa
caacaactgcagaaattcatgggtgaacaggcagtcattcagcaagcagatggaacgctc
acagttctagagccgaacagaattcgcactacaagcactcacacagtagttgatctgtcc
ggtttgaatacaggatcgtctctaaggatcggcctagtaaaaaacgcccccccacagaca
aaggtcctacacggtaaaggagagaagaagccagtgaaaaatgtgaaaaatgaaaaggct
acactggcagtgcagagcagtcctaaagtctctaaaccattaaaaagtgaggtgccttta
aagaatgacaagaaagtgccaacgacaaaagagttcagcgtcacgacaaagaagaaatca
aagaacagaaaaaggtttgaagacgagaagttggaagaaagtaaaccaggcgtgtgcaaa
cagttcaaaactatggtgcaggatggctataccgctctggctgaccaccgtagccgcaat
gcagagcaggccttcaggcaggcagtggagtttctggaaaacagcaaggaacttggactt
tccacaatggatgttctgttgctacattttggacgagtatcagccctgacagatatcggc
ctgcctgaggaacttgggcaagcacacagacttctggagaagatgaaatcatatgagctg
aggacgtttcagtgtcttgttttctacgccatcgggcgggtgtatttcagagagaacagg
tttgctgtggctctgaagcagttttcagattccctgcagatggtcaagaatcaaataacg
ccaggtaaactcacctggcctttaacaaaagagactgtcaaagaaacacagccagactat
ttcaagaatattctggaggaagctatagagttgtgcagatttcctcctatgcctgatgcc
atttgtcgacacgagaaatgtcacggccatttgaaagctgaaatctacttcacagaccca
gattttaagggcttcattcaaatttgctgctgtcagagctgcatcatcgagtaccacatg
acgtgttggaagacactgaagtcgacgttgtcctttgataagagtgaaaaggatttcctg
caagattcctgtttgactccggactgtgtcggaaaaatctgtagtatcaaaatctttggg
ccaacaggcctagtgaagtgtaagtttgaagctaccatcaccaaaccacagactccaaag
aagccaaaagtcaatcagaaatgtacaagtctgaagaagttaaaatcaaaggaagagcgc
caactcaagaggaagcagcataagcagtcattccaagaaacgccggttatcaaagacgag
attctgcaggagaaagaagacccaacaacccagattcaacagaaagcctggctgctgtac
agagatcgagttcttctgcagatcagccagaacatggagcttctgaaagaggagaagggc
ctccaggtgtcgaccctgaccagcagtctgaagccctggcttgaactggatttgtcaagg
gggaaccagatagctgggaggatactgaactggcaggaagagcagctggagagtctaggt
caggtcactgagctgctactagagaggaggaaccgggtttgggctcgtgtccttatccag
ctgctcagtagctgtttggatataaatcctaaactcaacaactgggcatgccagctcaac
aattcaggcctggatgctgccagatccttcattgacctaaacgcgggacacttggagcag
cttgacttggcttttttgctcaactttggtcccctccaggaagtggttatagaaaagctc
ggtactaggccagagcttttttcaagcattggcttgactgtgactgaatacttaaaacag
gccccgccacatgacatgaggctgtttatctggactctggaggagcatagagatgaatat
gtctcttgccacactatactggatgaatattttgatatgatggatggacattgttcagtc
ttaaaaaagtctgatgaaactcaaaataattctcctatgaagagtcggggccggaaaaag
aaacagaaagagccaaagggtgttattgttttgtctgggatgagaagcgtaactcaaaga
gatgaatgggaccaagaaatatttgaagatgactctttatcattccttcaccctgttgat
ccgttcagtgtacccagtcaccttcgggagcaagtggctgattttgaagatcagtacaac
accaccagacacagaagtcactataaaaagattttagacaacaaccctgacccgacaaaa
gagagtttgtatgactactttgatcaaatcctggaggagcatggtcccctcgtagctgag
gatcctctgctagtgggagaactagataatttccctcctgtggctcagcagaagatccag
gaagcgggcggcttcgagtccttcctcttggagtcccttcgcttcatcaagattgggagg
tccatcggcctggctaagcatgccgtctcactgcagcaagctgggaacggggccagcctg
gatgacctggatgacctggacgacctggatgacctagatgagataggagatccagacaca
tctgacttgcatgctagccatgacccagctttcttaagctacctggacggttattcatct
gctcagactgaagtctatcccatcctcccaaatccctatacatatggagccctccatctt
ccagtcagccagtcagctactggagttcctctgacaggttatggtcccttttcccatttg
actaatggtgacactcaacagcaagtgcctttctatttacctaatgactatggggacctg
gatctctataccagtgagatggacagtgaagtttgggacgatccaatcaaccatccaacc
gatccctcttcagacggagtcgcttcaatgataactgatgaaatcttttcaaagaaacat
gcggcagcacagacgtgtcaggagaccatgaggagtgtagcagtgaatactgaacctcat
gagccttttgagagctgcccgggtgaccttaacaaaaaggaaaagaacaacgagacgttg
ccggaggagatcaagaaaatatctactggctgtgacgctgtctccctcaggcacagagaa
gagctcgcttccctcgaggaagaagtgcagaagatcaatgccaacgtacaagtgaccaat
aaagagctggcactgttccagcacaagctggaggaggaggtgaggaaggatcaaaaggag
aagaaagccaaccaggaggtactgaagtctctcaaggtggagatagaacggttggtggag
gaacaggagagtctcgccagaaaaatccgagagaagaaatccaagtatgacacaaagttt
agtgatttcctggagctgagcaatcaatcagccgctgagaagatgagtctggaggatgag
atcaagcgctgtaagatctcagttaactttgctaccaggaggtctctcacagctcagttg
tcagtagtggagagcagtcgggatcaggctttatacgtcctctacagagagctggccaac
accaaggcttttcagaacaaactggatgaagccgtacacatattcccaaacaaggacctg
gaaatgaccagaagcaactgcagagccagcgtccaagaaatcgaaaagaaaatctccgct
gcggaggcacattacaaggagcagatagatcaggtgaagaagggcaggagagtcagcgag
ttgattgcagtcagcatgaacgagcttgaactttccgctgcaccattgtctgtggcaacc
aaagagattgtcccgccaccttcagcctccaacgtctccccaccgctcatcaagccgctt
ggggccgacaccccggccggtctaactctgatgcagcacaaacctccgatcaggacccag
gagcctccacacaacaccgtgtttgaaaaagcaatcgagcgcctggccaccatgttccct
gactatacaaggcccgacttgatgaggtttattcaggagttgcgttcatccagcggtgga
agcctgaacagcatggagttgcaagatatggttggcggagtgacccagctgatcctggac
catcaggagaagcttaatgctggtgccaaattaaacgtcacaggacgggggagtccagct
cagtatgggacctccccatacgcagtcccagtctggcagacacttggaccccagagagtc
acacactcaaacgcactgaatgtcgaggatccttgtatcatctgtcacgaggacatgagt
ccagacaccatctgcgtgctggagtgcagacacagcttccacaaggagtgtataaagtcg
tggctgaaggagcagagcacctgtcccacatgcagagatcatgcattgctgcctgaagat
ttccccatgctgcccgggaggaggcgccaagctctgtga
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integrated database retrieval system
