Larimichthys crocea (large yellow croaker): 104919444
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Entry
104919444 CDS
T04659
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
lco04510
Focal adhesion
lco04540
Gap junction
lco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104919444
04020 Calcium signaling pathway
104919444
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104919444
04540 Gap junction
104919444
09142 Cell motility
04810 Regulation of actin cytoskeleton
104919444
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lco01001
]
104919444
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lco04090
]
104919444
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
104919444
Protein kinases [BR:
lco01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
104919444
CD molecules [BR:
lco04090
]
Proteins
104919444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
RIFIN
C2-set_2
APH
Stevor
Motif
Other DBs
NCBI-GeneID:
104919444
NCBI-ProteinID:
XP_010729764
UniProt:
A0A0F8BYI1
LinkDB
All DBs
Position
XXII:complement(17895100..17907421)
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AA seq
1039 aa
AA seq
DB search
MASIRRRTRSLIVLHFLLGVLLVHPDGSICLELQPSSTEVLLNSNANFTVVCSGWSQVTW
RLPQDFLMDGVDVDNQGSSSVLQLSKVTWKNSGRYTCEEASSYQSKVVDIFIPGQGPEEW
FVPLGPGVVMKEAEEDTIPCVVSNPQLNVSLYERPGRTPVSGMTYEPGHGFTGRLKDTSY
VCVATHGDVEIESQVYYVFSIVVPKVMEVDMTVSSSVLKQGEVLTVNCTVKDTEMVFFNW
DFPRKEDFEPLTDFLPNRIRSFVNISAATVADSGVYVCVVQETIQERTVKKNVTVTVLDR
GYVYLWPSGETNVSSLLHHTVEFSLEVDAHPAPTFLWTKDNQTVAMGTTSITTTHHVDQR
YFSTLKLVRVQMDQAGSYTVTVSNEDDIQEAVFNLEVKVPPRITSLSELGSKAVLCVSEG
APPPSVTWYTCHSSNRCNNVTGGWRSLSANPESGAPQQNTTEVEERGVTQVRSVLTLKSL
SSLSAVRCEAKNSAGRRARDLRILSTSLLSQVAVLASVLVLVVIAVVFLIILILLWRKKP
RYEVRWKVIESVSPDGQQYTYLDPTQLPYNSTWEVPRDNIVIGQVLGSGAFGRVVEANVS
DLLHSHSTTKVAIKMVKPSSGAVQSLMSELKVMVHLGPHLNVVNLLGACTRGGPVYLITE
FCRHGDLVNYLQRNKHTFLQSDPHTKSDSDGGYMDMNKESAQYVAMKELSYADIEPAVYE
TPYTPPDQQEASLLLSDSPLLTLNDLLSFSFQVSQAMDFLSNRNCVHRDLAARNVLVCEG
KLVKICDFGLARDLMKDQDYIARGNSFLPVKWMAPESIFQNIYSSQSDVWSYGVLLWEIF
SLGGSPYPDVPMTQEFYSALKRGYRMSRPDHAPDNIFDLMKQCWEEKPQFRPSFSSLVAS
VGNMLSDDYKKCYQQLTENFMKSENPAVVRSRLSPSIAVGDLTDGETDTNGSPDPQVNSH
LLKVEPEEAGPSHGTYIIPITDITIETSGGAALDAVSPQLSDTQDTAGAQEVTSSEDRQE
TEELPASSCKREEEEESCL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatcagaagacgaacaagaagtctgattgtgctccacttcctgctgggtgtg
ctcctggttcatcctgatgggagcatctgtctggagctgcaaccttcatccactgaagtt
ctgctcaactcaaatgccaacttcactgtggtgtgctcaggctggagtcaggttacatgg
cggttacctcaagattttttgatggatggagttgacgtggacaatcaggggtccagcagt
gtcctgcagctctctaaagtcacctggaagaattctgggagatacacatgtgaggaggca
tcatcctatcagagcaaagtggtcgacatcttcatccctggtcaaggtccagaggaatgg
tttgtcccgctgggtccaggtgtggtgatgaaggaagcagaggaagataccatcccctgt
gttgtgtctaacccgcagctcaacgtctcgctgtatgaacgtcccggcaggacaccggtt
agcgggatgacgtatgagccgggccatggcttcacaggtcgtctgaaggacacatcatat
gtgtgcgtggccacccacggagacgtggagatagagtcacaggtgtactacgtcttcagc
attgtagttcctaaggtgatggaggtggatatgacggtgtccagcagtgtgttgaagcag
ggggaggtcctgactgtaaactgcaccgtcaaagacacagagatggttttcttcaactgg
gactttccccgcaaagaggatttcgaacctctgacagactttctgcccaatcggatccgc
tcatttgtaaacatctctgcagcaacagtggcagactctggtgtatatgtgtgtgtggtg
caggagacgatacaggaacgaactgtgaagaagaatgtcacggtgacagtactggatcga
ggttacgtctacctgtggccttcaggtgagaccaacgtgtcgtctctcctacatcacaca
gtggagttcagtttggaggtcgatgcccaccctgctccgactttcctctggaccaaagac
aaccagaccgttgccatgggaaccacctccatcaccaccacgcaccacgtagatcagagg
tatttcagcacgctcaagctggttcgagtccagatggatcaggcaggaagttacacagtc
acagtttccaatgaagatgacatccaggaggccgtctttaacctggaggtcaaagtgccc
cctaggatcacgtctctgtcggagctcggcagtaaggcggtgctgtgtgtcagcgaggga
gctccgcccccatctgtcacctggtacacctgtcacagctcaaacaggtgcaataatgta
acgggcggctggagaagcctatcagcaaacccggagagcggagctccgcagcagaacacc
acggaagtggaggagagaggagtcacccaggtacgcagtgtgttgacgctcaagagtctc
tcctctttgtcagctgttcgctgtgaagccaaaaattctgcaggacgacgagcaagagac
ctgcgaatactgtccacctctctcctgtctcaggttgctgtattggcatcagttttggtt
ttggtcgtcattgctgtcgtcttcctcatcattctcatcctcctctggagaaaaaaacct
cgttatgaagttcgttggaaggtcattgagtcggtgagtcctgacggacagcagtacacc
tacctcgaccccacgcaactgccctacaactccacctgggaagtaccacgagacaacata
gtaataggtcaggtgttgggttcaggtgcatttggtcgagttgttgaggcaaatgtgtct
gatctacttcactctcattctacaactaaagtggcaatcaagatggtcaaacccagtagc
ggtgcagttcagtctctgatgtcggagttgaaggtcatggttcatctcggtcctcacctg
aatgttgtcaacctgctgggagcgtgcacaagaggaggtcctgtctatctgatcacagag
ttctgtcgtcacggagacctggtgaactacctgcagaggaacaaacacaccttcttacag
agcgacccacacaccaagagtgacagtgatggaggttacatggacatgaataaggagagc
gctcagtatgtcgccatgaaggagctcagctacgccgacattgaacctgcggtgtacgag
acgccgtacacaccgccagaccagcaggaggcgtcgctcctcctcagtgactctcctcta
ctgacgctcaatgacctgctcagcttctccttccaggtttctcaggccatggacttcctc
tcaaacagaaattgcgtccacagagacctggcagcgaggaatgtgttggtctgtgaggga
aaactggtgaagatatgtgactttggtttggccagagatctgatgaaagatcaggattac
attgccagaggaaacagcttcctgccagtaaagtggatggctccagagagtattttccaa
aacatttacagcagtcagagtgatgtttggtcctatggagtgttactgtgggagattttc
tctctgggtgggagcccgtaccccgacgttcccatgacccaggagttttattctgctctg
aagagaggctacagaatgagtcgacctgaccacgctcccgacaacatttttgatctgatg
aaacagtgttgggaggagaaacctcagttcagaccttctttctcctcactggttgcctcc
gttggcaacatgttgagtgacgactacaaaaagtgttaccagcagctgactgagaacttc
atgaaaagtgaaaatccagctgttgtacgatccagactgagtccgtccatagctgtcgga
gatctgactgatggagagacggacacaaatggaagtcccgaccctcaggtgaactctcac
ctgttgaaggtggagccagaagaggcaggtccctcccatggcacttacatcatccctatc
acagacatcaccatagaaaccagcggtggcgctgcgctggacgcagtcagccctcagctg
tcagatactcaggacacagcaggagcacaggaagtgacctcatccgaggacagacaggaa
accgaggagcttcctgcttcatcctgcaaacgtgaggaagaggaggagagctgcctgtga
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