Larimichthys crocea (large yellow croaker): 104919513
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Entry
104919513 CDS
T04659
Name
(RefSeq) focal adhesion kinase 1 isoform X1
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04012
ErbB signaling pathway
lco04148
Efferocytosis
lco04370
VEGF signaling pathway
lco04510
Focal adhesion
lco04517
IgSF CAM signaling
lco04518
Integrin signaling
lco04810
Regulation of actin cytoskeleton
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
104919513
04370 VEGF signaling pathway
104919513
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104919513
04518 Integrin signaling
104919513
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104919513
09144 Cellular community - eukaryotes
04510 Focal adhesion
104919513
09142 Cell motility
04810 Regulation of actin cytoskeleton
104919513
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104919513
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lco01001
]
104919513
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104919513
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
104919513
Protein kinases [BR:
lco01001
]
Non-receptor tyrosine kinases
FAK family
104919513
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104919513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_C_FAK1
FERM_N_2
FERM_M
Kinase-like
Haspin_kinase
FERM_F2
Motif
Other DBs
NCBI-GeneID:
104919513
NCBI-ProteinID:
XP_019110362
LinkDB
All DBs
Position
XIII:650899..710962
Genome browser
AA seq
1100 aa
AA seq
DB search
MRGCEAASCLSVLSAGRHREGQTCISMAMSGCSPFPMCWDREYDRHLAAAVSAGKTMATA
YLDPNLNHALLGGAKSRLSAGGSDRTMAGSVDRVLKVFHHFETNTENSCWSSNIRYGDAT
DIRGIIQKILDIHKVRWTSCFGLRLSNTQSRDQVHWLHPDMGVSHVREKYEQARPNEEWR
YELRIRYLPKGFVQQFTEDKPTLNYFYHQVKNDYMTEIGEQVEQDIALKLGCLEIRRFFK
EMRGNALDKKSNYELLEKDVGLRRFFPKDLLDSVKAKTLRKLIQQTFKQVANLNDEQCIL
KFLEILAPIYRYDKECFKCALGSSWVIQVELAIGPEEGISYLTDKGSTPTHLANFNQVQS
IQYSAMEEKDRKGMLQLNVAGAAEPLTVTTASLTMAENLADLIDGYCRLVSMETHSFIVR
VQKEGERALPSIPKVSNNEKKLEAVRSGVRAISVSEDLSGDETDDYAEIVDEEDTYTMPS
ISYGVVEARDYEIQRDRIELGRCIGEGQFGDVHQGVYNSPDKPALPVAIKTCKNCTSDSV
REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLATLI
LFAYQLSTALAYLESKRFVHRDIAARNVLVSSVDCVMLGDFGLSRYMEDSSYYKASKGKL
PIKWMAPESINFRRFTSASDVWMFGVCMWEILMYGIKPFQGVKNNDVIGRIENGERLAMP
PQCPPTLYSLMTKCWSYDPSKRPRFTELKTQLNTILEEEKLQQEERLRMEMRRQVTVSWD
SGGSDEAPPKPSRPGYPSPRSSEGFFSSPQLNHFPPSAHGGVGGVGGSYPPTDSWSQHRP
EHTALWSPNMEDSGCVGQAMMEERLMMQQQQMEDDQRWLEQEESFMKTESRNSRGSIDRE
DGTLQAPGGSQHIYQPVGKPEHVAPPKKPPRPGAPGHLGNLASLCPVDSYNEGVKLQPQE
ISPPPTANLDRSNDKVYENVTGLVKAVIEMSNRIQPAAPEEYVPMVKEVGLALRTLLATV
DETLPVLPASTHREIEMAQKLLNSDLAELISKMKLAQQYVMTSLQKDYKKHMLMAAHALA
VDAKNLLDVIDQSRLKMIRI
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggtgcgaggccgctagctgtctatctgtcctcagtgcaggcagacacagggag
ggacagacatgtatttccatggcgatgagcggctgtagccccttcccaatgtgttgggac
agagaatatgacagacacctagcagcagcagtgtcagcagggaaaaccatggcgacggcc
tatctggaccccaacctgaaccatgccctcctgggaggcgccaagtcacgactgagcgcg
ggggggtcggaccgaaccatggccggctccgtggacagggttctgaaagtcttccatcac
tttgagaccaacactgaaaacagctgctggtcctccaatatcagatacggagatgcgacc
gacatcaggggaatcatccagaagattctggacatccacaaagtgcgctggacgtcttgt
tttggtctgcgtctcagcaacactcaatccagagaccaggttcactggctccaccccgat
atgggcgtatcccacgtcagagagaaatatgaacaggcacgaccgaacgaggagtggagg
tatgagttaaggatccggtatcttccaaaaggctttgtgcagcagtttacagaagacaaa
cctacactcaactacttctaccaccaggtgaagaatgactacatgacagagatcggtgaa
caggtggaacaagatatagctctcaaactgggctgtttagaaatcaggcggttcttcaaa
gagatgagaggaaacgccctggacaagaaatctaactatgaactactggagaaagatgtc
ggcttgaggcgttttttcccaaaagacctgttggattcagtcaaggctaaaactctccgt
aagttgattcagcagacgtttaagcaggtagctaatctcaacgatgagcagtgcatcctc
aagttcttggagatactggcaccaatttaccgctacgacaaggagtgcttcaaatgtgcc
ctcgggtccagctgggtgatccaggtggagttagccatcgggccagaggaagggatcagc
tacctcactgacaaaggatccacgcccacccatctagctaactttaaccaagttcagtcc
atccagtactcggctatggaggagaaggacaggaaagggatgctacaactcaacgtagct
ggagctgctgagcctctcacagttaccacagcgtcactgaccatggcagagaacttggct
gacttgattgacggttactgtcggctggtctccatggaaactcattccttcatcgtcaga
gtccaaaaagagggagagagagcgctgccttccatcccaaaagtgtctaataatgagaaa
aagttagaagcggtgaggagtggtgtaagagctatctctgtgtcagaagatcttagcggg
gatgagactgatgactatgcagagatagttgatgaagaggacacatacaccatgccctcc
atcagctatggagtagtcgaagcgcgggattatgagatccagagggacaggatagagtta
ggccgctgcataggagagggtcagtttggagatgtacaccaaggagtctacaacagcccg
gacaaaccggctctacccgtcgccatcaagacctgtaagaactgtacatcagacagcgtc
agagaaaagttcttacaagaagcattgacgatgcgtcagtttgatcaccctcacatcgtt
aagctgatcggggtgatcacagaaaaccccgtgtggatcatcatggagctctgcactctg
ggcgagctgcgttcgttccttcaggtgaggaagtacagtttggatttggccactctcatt
ctgtttgcctaccagctcagcacagcactggcttatctggagagtaaacgctttgtacac
agggacatcgcagctcgcaatgtgttggtgtcttcggtcgactgtgtgatgctcggagac
tttggtctgtcacgatacatggaggacagctcgtactacaaagcttctaaaggtaaactt
cctatcaaatggatggctcctgaatcaatcaacttcagaagattcacgtctgccagtgat
gtctggatgtttggtgtgtgtatgtgggagatcctgatgtacggcatcaagcctttccag
ggagtgaagaacaatgacgtgattggcaggatagagaacggagagcggttggccatgcct
cctcagtgcccgcccaccctgtacagcttgatgaccaagtgttggtcgtatgaccccagc
aagcggccgcgattcaccgaactcaaaacacaactcaacaccatactggaggaagagaag
cttcaacaagaggagagacttcgaatggagatgaggagacaagtcaccgtgtcatgggac
tctggagggtctgatgaagcaccgcctaaacccagtagaccaggttaccccagtcctcgt
tccagcgaaggcttcttctccagcccccagctcaaccacttcccgccttcagctcacggt
ggcgtgggaggagtaggaggcagctaccctccgactgattcctggagtcaacacagacct
gaacacactgcactgtggagcccaaacatggaggacagtggatgtgtaggccaggctatg
atggaggagaggctgatgatgcagcagcaacagatggaggacgatcagcggtggctggag
caggaggagagcttcatgaagacagagtccagaaacagcagaggaagcatcgacagagag
gacggcacactacaagcaccgggtggaagccaacacatctaccagccagtagggaaacca
gaacatgtggctcctcctaagaaaccaccacgtccaggagctcctggtcaccttggcaac
ctggccagtctctgccctgtggacagctacaacgagggcgtaaagttgcagcctcaggag
atcagcccaccccccaccgccaacttggatcgctccaacgacaaagtgtatgagaacgtg
acaggattggttaaagctgtgattgagatgtccaataggattcagcctgcagctccagag
gagtacgtcccgatggtcaaggaggttggcctggcgctgaggactctgctagcgacagtg
gatgagacacttcctgtgctgccagccagcacacacagagagatcgagatggctcagaag
ttgttgaattcagatttggctgagttgatatcaaagatgaaactggcccaacagtatgtc
atgacgagtttacaaaaggactacaagaaacacatgctaatggcagctcacgccctcgca
gtcgacgccaagaacctgctggatgtcatcgaccaatcacgactcaagatgatcaggatt
taa
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