Larimichthys crocea (large yellow croaker): 104919743
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Entry
104919743 CDS
T04659
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04110
Cell cycle
lco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104919743 (rb1)
04218 Cellular senescence
104919743 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104919743 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104919743 (rb1)
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104919743 (rb1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
104919743 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
104919743
NCBI-ProteinID:
XP_027129292
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All DBs
Position
XXII:17742114..17763109
Genome browser
AA seq
921 aa
AA seq
DB search
MPPKKRNSATAQSKELKPGAESGSPDKKESPELSVKKHRDKDAEFVALCKSLCVTDLVCD
RAWKLWKAVQDSLEEVAESQKRLWGACLFVSATDMDVTCFTLTQVLKAVSMNVKQFFALV
RKLDVNVDTISTKVNSALTRMEKKYSVTLALYERFEKTCKKIFALVSDGKERETIRSCWT
MFLLAKGRALQMEDDLVISFQLLLCTLELCIKRCPPDLLQPLYKSAISKVQSPPTRTSRR
NQSKAKSRPPEPEVDLQLLETLCKENECNAEEVKNVYQTSFSAFLDSLDLSRSADFPQVN
DINQQYEEHYLKSRDIDGRLFFDGDETVLAPKVEISQLERTPKKNLSDEDTVLIPPQTPI
RAAMNSIKQLRGDLTSSGDQPSTNLDTYFKNCTVDPKQDVLKRLETLGQAFSQRFGQAVG
PRCIVLGRQRFTLGVKLYYKVMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVIM
ATYGESSFKTGGYNHPAATAAGGGDAADTNVCFPWILDVVNLAAFDFYKVIESFIKADPT
LNKEIVKHLETCENLIMERIAWRTGSPLFELLKQEHEGGAAEQVEPPASFNQPLQHNHTA
ADLYLSPTRPNVRVLPPQSPATPSSQPSSQPPQASTQPAGQSLPKSNSLSLFYKKLYRLA
YTRLKILCSYLLSSHPELEPIIWTLFQHTLQHEHELMRDRHLDQLMMSAMYAICKVKSVD
LRFKTIVTAYKNMPNTSQETFKHVLITEGHYDSIIVFYNQVFMQKLKTNILQYASTRPPP
LSPIPQIPRSPYKLPSSPLRVPGSNNVYISPLKSPRMSPSIMTPRTRMLVSIGESFGLAN
RFQKINQMVNSSDRSFKRTLDLGATPKPLKRLRFDVDGQDEADGSKSGRDSTLIQKLAEM
NSTRSRMQEQKMKEDAESRKE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaaaaaacgcaactctgcgacggcacagagcaaagagctgaagcccggcgct
gaaagtggctctccagacaagaaggagagtccagagttatctgttaaaaagcacagagac
aaggatgctgagtttgtggccctgtgtaagagcctctgtgtgaccgacctggtgtgtgac
cgagcctggaagctgtggaaagctgttcaagactccctggaggaagtagctgagagtcag
aaaaggctgtggggggcttgtctgtttgtgtcagccacagacatggatgtcacctgtttc
accttaactcaggttctgaaagcagtcagtatgaatgtgaagcagttttttgctctggtg
aggaaactggatgtgaacgtggacactataagcaccaaggtgaattcagcactgacacga
atggagaaaaagtacagcgtgacactggctctctacgagaggtttgagaaaacgtgcaag
aaaatctttgctttggtgtcggatggcaaggagagggagaccattcggagctgttggaca
atgtttcttttggccaagggaagggccttgcagatggaagatgacctggtcatatcattc
cagctgctgctttgtacgctggagttatgcatcaagcgttgccctccagaccttctgcag
cctctttacaaatcagctatcagcaaagttcagagtcctccgacacgaacatctcgtcgc
aaccagagcaaagccaaatctcgacctccggagcctgaggtggatttgcagcttctcgaa
actttgtgcaaagagaacgaatgcaatgcagaagaggtaaagaatgtgtaccagaccagt
ttctcagctttcctggactcactggatctttcaagatctgcagattttcctcaggtgaac
gacatcaaccaacaatacgaagagcactacctcaagagtcgagacattgatgggcggctg
ttttttgacggagatgagactgttcttgcacctaaagtcgagatatcacagttggagaga
acgccaaagaaaaacctttcagacgaagataccgtactcatcccgcctcagactccaatc
agagcggccatgaactccattaagcagttgaggggtgatctcacctccagtggggaccag
ccttctactaacctggatacatatttcaaaaattgcactgttgacccgaagcaggacgtg
ctgaagcgtttggagacgctcggacaggcgttcagccaaaggttcggtcaggcagtcggc
cctcgctgtatagtactcggcagacagaggttcaccctcggtgtcaaactctattacaaa
gtcatggaggcaatgctgaaatcggaagagaagcggctgtctgtccagaatttcagtaaa
ctcctcaatgactccacatttcacacatcgcttttggcctgcgctctggaggtgatcatg
gcaacgtatggagagagcagttttaagaccggaggatacaaccaccctgctgctaccgct
gctggtggtggtgatgcagctgatacaaacgtgtgcttcccttggattcttgatgtggtg
aacctcgccgccttcgacttttacaaagtcatcgagagcttcatcaaggccgaccccacc
ctgaacaaagaaatcgtgaaacacctggagacctgcgagaacctcatcatggagaggatc
gcatggaggacgggctcgccgctgtttgagctgctgaaacaagagcatgaaggcggagcg
gcagagcaagtggagcccccagctagtttcaaccaaccactgcagcacaaccacaccgca
gctgacctatatttgtcccccacgcgtccgaacgttcgtgtattgccaccccaatctccg
gccacgcccagctctcagccttcctctcagcctcctcaagcttcgacccagcctgccggc
cagagcctcccaaagtccaactccctcagcctcttctataagaaattgtaccgcctggcc
tacacgaggctcaagatactctgctcctacctgctgtcctcccaccctgaactggagccc
atcatatggaccctgttccagcacaccctgcagcacgagcacgagctgatgagagaccgt
cacctcgaccagttgatgatgtcggccatgtatgccatttgtaaagtgaagagtgtcgat
ctgcgcttcaagaccatcgtcacagcctataagaacatgcccaacaccagccaggagacc
tttaagcatgtgttgatcactgagggacactatgactccatcatagtcttctacaaccaa
gtgttcatgcagaagctgaaaaccaacatcttgcagtacgcgtcgaccaggccgcccccc
ctctcgccaatcccgcaaataccacgcagcccgtacaagctccccagctcacctctgcgc
gtgcctgggagcaacaacgtgtacatctccccgctgaaaagcccacgcatgtccccgagt
atcatgactcctcgcaccaggatgctggtatcgattggtgaatcttttgggctggccaat
cgtttccagaagatcaaccagatggtcaacagcagcgaccgctcctttaagaggaccctg
gatctcggcgccaccccaaagcccctgaagaggctacgtttcgatgtggacgggcaagac
gaagccgacggcagcaaatctggaagagactccacactgatacaaaaacttgcagagatg
aactctactcggagtcgcatgcaggagcagaagatgaaggaggacgcagaatcaaggaag
gagtaa
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