Larimichthys crocea (large yellow croaker): 104922030
Help
Entry
104922030 CDS
T04659
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04144
Endocytosis
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104922030
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104922030
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104922030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104922030
04121 Ubiquitin system [BR:
lco04121
]
104922030
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104922030
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104922030
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
HECT type E3
104922030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
104922030
NCBI-ProteinID:
XP_010733037
LinkDB
All DBs
Position
VI:complement(16324732..16338627)
Genome browser
AA seq
868 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHSPKWKQALTVIVTP
VSKLIFRVWSHQTLKADILLGMATLEISETLKANDLKLSEVVQTLHLSSDRDPRDIVGDL
SVCLDGMQVDAETFASAEREHATVSNGNARQNGDTGNRSSRDTSPSSDSDEWIIVPNGHA
VNGKGSPSQSPGGSNASRPPRPARPPPATPRRPAASPTSTSSSSPSELSEGPASDGSSQA
SASGCSNQQDVSGTGAATAGSSQTASGPKLGTSASVPPATTTPRITPMSNGPLPPGWEQR
VDQNGRVYYVDHIEKRTTWDRPEPLPTGWERRVDPMGRVYYVDHITRTTTWQRPTQESVR
NYEEWQHQRSQLQGAMQQFNQRFIYGLQDQLAATANKEFDPLGPLPHGWEKRTDTNGRVY
FVHHPTRTTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSS
LENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVSRKTLFEDSFQQIMSFHPQDLRR
RLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHL
KYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKDNN
IEECGLEMFFSVDKEILGEVTTHELKADGGNIQVTEENKEEYIRLVAEWRLSRGVEEQTQ
AFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRNTIYRHYARSSKQILWFWQF
VKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRL
DLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaattgcaagtcacagttctttcagccaagctgaaggaaaacaaaaagaac
tggtttggtcccagtccgtatgtcgaggtagccgtggatggccagtcgaagaagactgag
aaatgcaacaatacgcacagtcccaaatggaagcaggctctcacagtaattgtgactccg
gtcagcaagctaatctttcgtgtttggagccaccagacactgaaagcggacatccttttg
ggaatggccacactagagatcagtgagacccttaaggctaacgacttgaaattatctgag
gtggtgcagacactgcacctgagctctgacagagacccccgggatattgttggtgacttg
tcggtctgtctggacggcatgcaggtagatgcagaaacctttgcctcggcagagagagaa
catgctacagtttcaaatggaaatgcaagacaaaatggagacactggcaacaggtcaagc
agagacacatctccctctagtgactcagacgagtggattattgtacctaatggtcatgct
gtcaatggtaaggggtctccttcccagtctccagggggctccaatgcctcacgtccaccc
agaccagctcgacctcctcctgctacgcctcgcagaccagcagcctcaccaacctctact
agcagttcctcccccagtgagctgagtgaaggtccagcttccgatggctcctctcaggcg
tcagctagtgggtgttcaaatcagcaggatgtctcaggcacaggagcagcgactgcaggt
tcttcacagacagctagtggccccaaactagggacatctgcctcagtacctccggccaca
acaactcccagaatcacacccatgagcaacggtccattaccaccaggatgggagcaaagg
gtggaccagaacggacgggtgtactatgtggatcacattgagaaaaggacaacctgggac
agacctgagcctctgcctacagggtgggaacgcagggtggatccgatgggtagagtgtac
tatgtggaccacataacccgaactactacgtggcaacgccccacgcaggagtcggtgcgt
aattatgaggagtggcagcaccaacgcagccaattgcagggagccatgcagcagtttaac
cagagattcatttatgggctccaagaccagttggcagccacggccaataaggagtttgac
ccacttggacctctgccacatggttgggagaagagaacagacaccaacggcagagtgtat
tttgttcatcacccgactcgtacgacacagtgggaggaccccaggacacaagggctgctg
aatgataagcccctgccagaaggttgggagatgaggttcactgtggatggtattccctat
tttgtagaccacaaccggagaaccacaacctacatcgacccacgcacagggaaatcctca
cttgagaatggaccacagataacctatgtcagggacttcaaagccaaagtgcaatacttc
aggttctggtgtcagcaattgtcgatgcctcaacacattaagattactgtctcccgcaaa
accttgtttgaggactcgtttcaacagatcatgagtttccacccacaagatctgaggcga
cgactgtggattattttccctggagaggaaggtttggactacggaggtgtggccagggaa
tggttcttcttgctctcccatgaggtactgaaccccatgtactgtttgtttgagtacgct
ggcaaggacaactactgtctgcagatcaaccctgcctcctacatcaaccctgatcacctc
aagtacttcaagttcataggacgtttcattgccatggccttgttccatggcaaattcatt
gacacaggtttctcactgcccttctacaagcgtattctgaacaaacctctggctctcaaa
gacctggagtccatagatccagagttttacaactcactcatctggatcaaggataataac
atagaagagtgtggtctggagatgttcttctcagttgacaaggagattctgggggaggtc
accacccacgagctgaaagcagatggagggaacatccaagtaactgaggaaaacaaggag
gaatacatcaggttggttgcagagtggaggctgtcaagaggagtggaggagcagactcaa
gcattctttgaaggcttcaatgaagttttgccccagcaataccttcaatactttgatgct
aaagaattagaggtgatgctctgtgggatgcaggagatagacctggtggactggcagaga
aacacaatctacaggcattatgcccgaagtagcaaacagatcctctggttctggcagttt
gttaaggagatggacaacgaaaagaggatgagactgctgcagtttgtcacaggaacctgt
cgtcttcctgtgggtggcttcgctgacctgatggggagcaacggcccccagaaattctgc
attgagaaagtgggcaaagaaaactggcttccacgaagccacacatgctttaatcgcctg
gacctccctccatacaagagctacgagcagctgaaggagaagctcatgtttgctatagaa
gagacggaagggtttggacaggagtaa
DBGET
integrated database retrieval system
