Larimichthys crocea (large yellow croaker): 104922249
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Entry
104922249 CDS
T04659
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03266
Virion - Herpesvirus
lco04514
Cell adhesion molecules
lco04520
Adherens junction
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
104922249
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104922249
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104922249
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104922249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104922249
04090 CD molecules [BR:
lco04090
]
104922249
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
Nectin family
104922249
CD molecules [BR:
lco04090
]
Proteins
104922249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
ig
Ig_3
Ig_2
I-set
C2-set_3
TM_ErbB1
C1-set
DUF4342
Syndecan
Motif
Other DBs
NCBI-GeneID:
104922249
NCBI-ProteinID:
XP_010733332
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Position
XVI:complement(4130358..4208357)
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AA seq
528 aa
AA seq
DB search
MARHDARNWQDCSKMIGLLCMFASILLQHGVSGQRVKVEPEVLSYPGQTVNLRCAFTDAT
GIQLTMVTWIYEPKEGERINIAVFHPSFDANYPDSPVKGRISFTPSPPDLASPSIQITDV
RMSDEGKYICEYATYPSGNEQGITYLVMLAKPQNSASIVTVEAGTKQVVVARCESVNGRP
PAQISWVTTANGNATTVSKQGTDNTVTMISEYRMVPTAADNGKDISCVVAHRTQVKPESF
PLKLAVLYPPQVTIVGYDNNWYLGRTNVILTCQATGNPHPSTVQWKTMSGEMPDIVQIAG
KELKVLKVDDTVNTTFVCEVKNRIGTGRDQVTAMVREPSVNPTNAGVVAGAVIGSLLALL
LVAALIAVLVTRSRRQQQGYRANDMKTRIFGGGKKASKNGTGGGTGTGGVGGGNNNGPIY
VYNESSSHHGLGEKNNHHQPLTMGGRPEVVATTPTAQDILLSNELDDAERRKFDELEEEE
RYDNFSGGAPILQLRPPQDQDDIIGDYLDDDMESQRDGSVISRTAVYV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacatgacgcccgaaattggcaagactgctccaaaatgatcggactgctctgc
atgttcgcgtcgatacttctccaacacggagtgtcgggtcagcgggtgaaggtggagccg
gaggtgttgtcatatcccggtcagaccgtcaacctgcgctgtgccttcaccgatgccact
gggattcagctcacaatggtcacgtggatctatgagccgaaagaaggagaaaggatcaac
atcgctgtgtttcaccccagctttgatgccaactatcctgattctcctgtgaagggcaga
atcagcttcacacccagtccgccagacctggccagtccttccatccagataaccgatgtt
agaatgtccgatgaggggaagtacatctgcgagtatgctacctaccccagtggcaacgag
caaggcatcacatacctggtcatgctggctaagcctcagaactcggcctccatcgtaaca
gtggaagcaggcaccaagcaggtcgtcgtggcacgctgcgagtctgtcaatggccgtcca
cctgcccaaatctcctgggtgaccacagccaatggcaatgcgacaacagtgtccaagcag
ggtaccgacaacacagtgaccatgatcagcgagtaccgcatggttcccacagcagcagac
aacgggaaagacataagctgcgtggtggcacaccggacccaggtcaaaccagagagcttc
ccgctgaagctggcggttctgtacccccctcaggtgacaatagtaggttacgacaataac
tggtacttgggtcgtacaaatgtgatactcacctgccaggctaccggaaaccctcacccg
tccactgtccagtggaagactatgtcaggagagatgccagacatcgtgcagatcgcaggc
aaagagctgaaggtgctgaaggtggatgacacggtcaacaccactttcgtctgtgaggtc
aagaatcgcatcgggaccggcagggaccaggtcacagccatggtcagagagccctcagtg
aacccaaccaacgctggcgtggtggcgggagctgtgattggctccctgctggccctcctt
ttggtcgccgctctcatcgccgtgcttgttacccgtagccgcaggcaacagcagggttac
cgtgccaatgacatgaagacgcgcatatttggtggaggcaagaaggccagcaagaacggc
acaggtggaggcacaggcactggcggagtgggtggcggtaacaacaatggcccaatctat
gtttacaacgagagctcatcccaccacggcctgggagagaaaaacaaccaccatcagccg
ctcaccatggggggccggcctgaagttgttgccacgacacccaccgcccaagatatcctg
ctaagcaatgaattagacgatgctgaaaggaggaagtttgatgagctggaggaggaggag
aggtatgacaacttcagtggaggggcccccatccttcagcttcgcccaccgcaggaccag
gacgatattattggagattacctggatgatgacatggagtcccagcgagatggctctgtc
atctcacggactgccgtttacgtatag
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