KEGG   Larimichthys crocea (large yellow croaker): 104923075
Entry
104923075         CDS       T04659                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04145  Phagosome
lco04514  Cell adhesion molecules
lco04672  Intestinal immune network for IgA production
lco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    104923075
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104923075
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    104923075
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    104923075
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104923075
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104923075
  Exosomal proteins of epithelial cells
   104923075
  Exosomal proteins of breast milk
   104923075
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 I-set C2-set_2
Other DBs
NCBI-GeneID: 104923075
NCBI-ProteinID: XP_019126235
UniProt: A0A6G0IB85
LinkDB
Position
XIII:16705371..16707688
AA seq 240 aa
MKCSAIILLLNIFSAFSQFPHDITYMVGCFENGTTEIQYQFDSEEVLHVDFKRQTVVFSL
PRIITAQAEKIFADMHVYRNALKAKRVCAAFEAFLKAEKMHPAEEKDMPRSVLYPAEEVQ
LGVKNKLICLVNNFYPPDINVSWTRNDRPVSEGVSLSRYYPNNDQTFRQFASLTFTPREG
DIYSCTVEHSALDRPITRIWDHELSQKSLGPDIFCGVGLTLGLLGVAAGTFLMVKGCHGQ
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaagtgctctgctataatcctgctgctcaacatcttctctgccttttcgcaatttccc
catgacattacctatatggtgggctgcttcgagaatgggacgactgaaatacagtatcag
tttgactctgaggaggttctacacgtggattttaaaagacaaactgttgtattcagtttg
cccagaataattacagcccaggcagaaaagatttttgctgatatgcatgtttatagaaat
gctttaaaagccaagagggtgtgtgcagcatttgaagcgttcttgaaagcagagaagatg
catccggcagaggaaaaagacatgcctaggagtgtcctctaccctgcagaggaagttcag
ctgggagttaaaaacaaactcatctgcttagtgaacaacttctacccaccggacatcaat
gtcagctggaccagaaatgatcgtccggtgtcggagggggtgtcactcagtcgatattat
cccaataatgatcaaaccttccgccagttcgcctccctgacattcacaccgagggagggg
gacatttacagctgcactgtggagcactctgccctggacaggccgataacaaggatctgg
gatcatgaactgagtcagaaaagtcttggaccagatattttctgtggagtgggccttact
ctgggtctgttgggagtcgcagctggaacatttttgatggttaaaggatgccatggacaa
taa

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