Larimichthys crocea (large yellow croaker): 104924322
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Entry
104924322 CDS
T04659
Symbol
mtr
Name
(RefSeq) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00270
Cysteine and methionine metabolism
lco00450
Selenocompound metabolism
lco00670
One carbon pool by folate
lco01100
Metabolic pathways
lco01230
Biosynthesis of amino acids
lco04980
Cobalamin transport and metabolism
lco04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
104924322 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
104924322 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104924322 (mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
104924322 (mtr)
04980 Cobalamin transport and metabolism
104924322 (mtr)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
104924322 (mtr)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-GeneID:
104924322
NCBI-ProteinID:
XP_010735941
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Position
XVI:1152446..1179352
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AA seq
1269 aa
AA seq
DB search
MAPTNVSHQFSSGAGCRCPLESELRAVLQQRILVLDGGMGTMIQQEKLEEEDFRGKEFKE
HPLSLKGNNDLLSITQPDVIYRIHKEYLLAGADIIETNTFSSTSTAQADYGLEHMAYRLN
RASAELARKAADDVTKQTGCKRYVAGAVGPTNKTLSVSPSVERPDFRNITFDALVEAYSE
QVRGLLDGGADILLVETIFDTANAKAALYAIDLLFDKSYQRKPIFISGTIVDRSGRTLSG
QTGEAFVVSVSHAKPLCIGLNCALGATEMRPFIEAIGKCTTAFVICYPNAGLPNTFGGYD
ETPQVTASNLKEFATDGLVNIVGGCCGTTPGHIRAISEAVKHCKPRVPAADIYQDYLLLS
GLEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSIAKAQVEMGAQVLDINMD
EGMLEGPTAMARFCNFISSEPDIARVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGE
EEFLHRAATVMRYGAAVVVMAFDEEGQATDTDRKVEICTRAYKLLVSKVGFDPNDIIFDP
NILTIGTGMEEHNDYAIHFIRATKLIKETLPRARVSGGLSNLSFSFRGMEAIREAMHGAF
LYHAIKDGMDMGIVNAGNLPVYDDIDKQLLLLCENLIWNKDPDATEKLLSYAQSNVKGGK
KAVQTDEWREGSVEDRLEYALIKGIEKYVVDDVEECRAQVDRYTRPLHIIEGPLMNGMKV
VGDLFGAGKMFLPQVIKSARVMKKAVGYLIPFMEKEREEMMALTGSTEEVDPYHGTIVLA
TVKGDVHDIGKNIVGVVLGCNNFRVIDLGVMVPCDKILREAIGQKADIIGLSGLITPSLD
EMIHVAKEMERLGITTPLLIGGATTSKTHTAVKIAPRYTSPVVHVLDASRSVVVCSQLLD
EAAREEYFEDLKEEYDEIRQEHYDSLKDRRYLSLSQAREKALHIDWLCAPRPVRPQFLGS
HVFECYDLKSLVDFIDWKPFFDVWQLRGKYPNRGYPKIFNDKTVGSEARRAFDDAQRLLN
QMIDNCSLKGRGLVGFWRAQSDGDDINVYKDDVGVQRDTEPIATFHGLRQQVEKDSSSSE
PYLCVSDFIAPVDSGVADYIGMFAVGVFGAEELSQQFQAQGDDYNSIMVKALADRLAEAF
AEELHARVRKELWGYSSDEALQATDLHRVRYQGIRPAAGYPSQPDHTEKTVMWSLAEIQE
KTGIALTESLAMTPAASVSGLYFSNPQASYFAVGKITKEQVEDYSRRKEMSVEDVERWLA
PVLGYDSEE
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactaacgtcagccaccagttctcctcgggagcgggatgcagatgtccatta
gagtctgagctgcgagcagtgttgcagcaaaggattctggtcctggacgggggtatggga
accatgatccagcaggagaagctcgaagaggaagatttcagggggaaggagtttaaagag
caccctctttcactgaagggcaacaacgaccttctcagcatcacacagcctgatgtcatt
tacagaatacacaaggagtacctgctggctggggctgacatcatagagaccaacacattc
agcagcacttccacggcccaggcagactatggactggagcacatggcatatcgcctcaac
agggcgtctgcagagctggcgaggaaagcagccgatgatgtcaccaagcaaaccggttgt
aaacgctatgtggccggagcagtcggacccactaataaaaccctgtctgtgtccccgtct
gtggagaggcctgacttcaggaacatcacatttgatgctcttgtggaagcctactcagag
caggtcagaggtttattagatggaggcgcagacatccttctggttgaaaccatctttgac
actgccaatgcaaaggctgccttatatgccatcgacctactgtttgacaagagctaccaa
agaaaacccatatttatctcagggaccatcgttgaccggagtggacgaacgctgtctggt
cagacgggtgaagcctttgtagtgagtgtatcccacgctaaacctctatgtattggtctg
aactgtgccttgggagcgacggagatgaggccgttcatcgaggccataggaaaatgcacc
acagcctttgttatctgttatcccaatgcaggtcttcccaacacatttggagggtatgac
gaaactccccaagtaacagcctccaatttaaaggagtttgctacagatggactagtcaat
attgtgggaggctgctgtgggaccactccaggacacatcagagccatttctgaagcggtt
aaacactgcaagccccgagttcctgctgctgatatttatcaagactacttgctgctgtca
ggtttagagccgttcaggattggcccttacactaactttgtcaacattggcgaacgctgc
aacgtggctgggtcacgcaagtttgccaagctgatcatggcaggaaactatgaggaggca
ttgagcattgctaaggcccaggtggagatgggggcccaggtcctggatataaacatggac
gaggggatgctggaggggccgacagctatggcccgattctgtaacttcatttcttccgag
ccagacatcgcacgggttcctctgtgtattgactcctctaacttctccgtgatcgaggcg
ggattgaagtgctgtcagggaaagtgtatagtgaacagtatcagtctgaaggaaggagag
gaggagttcctgcacagagctgccactgtgatgcgctacggagctgctgtggtggtcatg
gccttcgacgaggagggacaggccacagatacagaccggaaagtagagatctgcactcgg
gcctacaagctgctggtcagcaaagtgggatttgaccctaatgacatcatcttcgacccc
aacatcctcaccatcggtacaggcatggaggagcacaacgactacgccatccacttcatc
agagcaaccaaacttatcaaggagacattaccaagagccagggtgagtggaggtctgtca
aacctgtccttctcattcagagggatggaggccatcagagaagctatgcatggagcgttt
ctctaccacgctatcaaggatggtatggacatgggcatagtgaatgctgggaacctgccc
gtctatgatgacatagataaacagctgctgctgctgtgtgaaaacctcatctggaacaaa
gaccctgatgctactgagaaactactttcctacgcacagagcaatgtgaaaggagggaag
aaggcggttcagacagatgagtggagagaaggaagtgtggaggacagactggagtacgct
ctcattaagggaatagagaaatatgtggtggatgatgtggaggagtgtcgggctcaggtt
gatcgctacactcgaccccttcacatcatcgagggccccctgatgaacggcatgaaggtg
gtgggagatctctttggagccggcaagatgttcctgccacaggtgatcaagtcagctcgt
gtcatgaagaaggcggtgggctacctgattcctttcatggagaaggagagggaggagatg
atggcactgacggggtcaacagaggaagtggacccctatcacggcaccatcgtcctggct
acagtgaagggagatgtccatgatattgggaagaacattgtaggcgtggtgctgggttgc
aacaacttcagagtaattgacctcggtgtgatggttccctgtgataagatccttagagag
gccattggacagaaagcagatatcatcggtttgtctggtctcatcaccccctctctggat
gagatgatccatgtggccaaagagatggagagactggggattacaacaccactgctgatt
ggaggagccaccacatcaaagacacacacagcagtgaagattgcccctcgctacacttct
cctgttgtccatgttctggacgcctccaggagtgtggtggtgtgctcgcagctcctggac
gaggctgcgagggaagagtactttgaggacctgaaagaggagtatgatgagatccggcag
gagcactatgactccctgaaggatcgtcggtatctgtctctgtcccaggccagagagaag
gcgttacatatagactggctctgtgcgcccaggccagtgcgtcctcagttcctgggcagc
catgtgttcgagtgctacgacctgaaaagtctggtggacttcatcgactggaagcctttc
tttgatgtgtggcagctgagaggaaaataccccaacagaggttaccccaagatcttcaac
gacaagactgttggttcggaggctcgtcgagcctttgacgacgctcagcggctgctcaac
cagatgattgacaactgcagtctgaaggggcggggcctggtgggattctggcgcgcccag
agtgacggcgatgacatcaacgtgtacaaagatgatgtcggagtgcaaagagacacagag
cccatcgccacattccacggcttaaggcaacaggtggagaaggacagctccagttcagag
ccctacctgtgtgtgtcggacttcatcgcccctgtagacagcggtgtggcagactacatc
ggcatgtttgctgtgggcgtgtttggagccgaggagctgagtcagcagtttcaggcacag
ggcgatgactacaacagcatcatggtcaaagctctggctgaccgactggctgaggccttt
gctgaggagctccacgcccgtgtgcgtaaggagctgtggggctacagctctgacgaggct
ctgcaggccacagacctccacagagttcgataccagggcatcagacctgcagccggctac
cccagccagcctgaccacacggagaagaccgtcatgtggagcctggctgagatccaggag
aagactggtattgctctgacagaatccctggccatgacgcccgctgcctctgtgtctggg
ctttacttctccaaccctcaggcctcgtacttcgccgtgggaaagatcaccaaggagcag
gtggaggactattccaggaggaaagagatgagtgtggaggatgtggagagatggctggct
cctgtgctcggttatgacagtgaggagtag
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integrated database retrieval system
