Larimichthys crocea (large yellow croaker): 104925295
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Entry
104925295 CDS
T04659
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase manic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00514
Other types of O-glycan biosynthesis
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104925295
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104925295
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lco01003
]
104925295
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104925295
Glycosyltransferases [BR:
lco01003
]
Glycan extension
O-Glycan
104925295
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
104925295
NCBI-ProteinID:
XP_010737194
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Position
X:complement(31236680..31257216)
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AA seq
360 aa
AA seq
DB search
MTPGSVGCDVVVWCKRWIRRRLPVLIFTFFIILYVDFQLRTNSLPKVSVAHHPSPGAQHH
STQQTPSPAKNTQNPANNSRSGNGGHPATHVTRPKLKLEDIFIAVKTTGRFHKTRLALLL
ETWISRTRAHTFIFTDTEDEDFRSQGHNMVVTGCQSDHSQQALSCKMSAEYDGFMASDKR
WFCHVDDDNYVNPEALLSLLSAFPQDSDIYVGKPSLDKPITAHELLEGNATREVRFWFAT
GGAGFCLSRRLAEKMAPWASGSRFEQTSAKIRLPDDCTVGFIVEKRLSISMVHCPLFHSH
LENLLLISHRSIPHQVTLSYGMFENKMNSIEVKGSFSKEEDPSRFKTVHCILYPFTSWCP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaggctcagtgggatgtgatgtggttgtctggtgtaagagatggatacgtcgg
aggttgcctgtcttgattttcaccttcttcatcatcctctacgtggatttccaattacgc
accaacagccttcccaaagtcagcgtggctcaccatccatcacccggtgcgcaacaccac
tccacccaacagactccatccccggccaaaaacacacagaacccggctaacaacagcaga
agcggcaatgggggacacccggcgacacatgtgacccggccgaaactgaagctggaggac
atcttcatcgctgtgaagaccaccgggaggttccataagacgcgtcttgcgctccttttg
gagacgtggatctccagaactagagcgcatacatttatttttacagacacagaggatgag
gacttccgttcacagggtcataacatggtggtaacaggctgtcagtcagatcacagccag
caggctctgtcctgcaagatgtctgctgagtacgatggctttatggcctcagacaagagg
tggttttgtcacgtggacgatgataactacgtcaacccagaggccctcctgtccctgctc
tctgccttcccccaggacagcgacatctacgtgggcaaaccgagtctggacaaacccatc
actgctcacgaactgctggagggcaatgcaacgagggaagtgcggttctggttcgcgaca
ggaggagcaggattctgtctgagtcggcgactggcggagaagatggctccctgggccagt
ggctcccggttcgagcagacatcagcaaagatccgtctccctgatgactgtacagtgggt
ttcatcgtggagaagaggctcagcatctctatggttcactgtcctttatttcactcccac
ctggaaaacctactgctcatcagccacagaagcataccacaccaggtaactctgagctat
gggatgtttgagaacaagatgaacagcatcgaggtgaaaggaagtttctctaaagaggaa
gacccctccaggtttaagactgtgcactgcatactgtatcctttcaccagctggtgtcct
tga
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