Larimichthys crocea (large yellow croaker): 104926679
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Entry
104926679 CDS
T04659
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03272
Virion - Hepatitis viruses
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
104926679
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104926679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104926679
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104926679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
TMEM154
DUF4381
DUF4010
Motif
Other DBs
NCBI-GeneID:
104926679
NCBI-ProteinID:
XP_019129801
LinkDB
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Position
X:complement(8880374..8890502)
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AA seq
868 aa
AA seq
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MSGTWRGLSTCWCLLMLAHFWLQTDAAFVCSSTQLRCGNGRCITRRWICDGTDDCGDGTD
ELPATCANKTCLQAEYDCGAPMHQCIPDGWHCDGKADCTNGADESNCTAKQCKPDEFKCA
SGECISTSFVCDKENDCPDGSDEVSCPTPTCSPQSFQCNNSACIMLLWLCDGDEDCTDGS
DEWPQNCVGRLPDKTAQRCGVHEFQCANGDCVHSNWRCDGDFDCKDRSDEVNCSRPTCRP
DEFQCNDGACIHGSHQCDRNNDCRDGSDEIGCHTESVCEGPTKFKCRSGECISMEKVCNG
QRDCSDYSDEPVKECNKDECSTGNSGCSHFCIDLKIGFNCSCPAGYSLKMDKKTCEDIDE
CAEPDTCSQICINLPGSYKCDCGEGYEIDPASKTCKTESGTVPTLFFTNKHEVRKMTVDR
SEYVRLIPGLKNAVSLDMDMSNKMIFWSDLTLKKIYSSRIDVAGNSSYHTVVIGSGIEAP
EGIAVDWIHGNIYWTDGVLKTISVATTDGSKRKTLITENLDKPRAIAVDPINNFMYWTDW
GDEAKIEKSGLNGVDRVVLVKENILWPNGITLDMVNQRLYWVDSKLHTLSSIDVNGGTRH
SLIISEEKLAHPVSLTVFEDKVFWTDISAGAVFSASRLTGKDITTLATDLNQPEDIVLYH
NLKQTNGTNGCIESNSMNGGCEFLCLPAPVINQHSPKFTCACPDNMAMGPDMRKCVTASV
DQPAEIKTAAPLLPKDSTKTSAPRQTTTATIPTTRATKQTTTISTSPTTQQSAATGQGNR
LAALPEEAPSSPPMALYVVLPIIVMALVIFGGALLWRHWRLKNTNTIHFDNPVYQKTTED
ELHIFRNNSEGYVYPQRQMLSMDDLDVA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggacgtggaggggactgtccacatgctggtgtctgctgatgctggcgcatttc
tggcttcagaccgatgcggccttcgtgtgcagctccacccagctgaggtgtgggaacggg
aggtgcatcacccgcaggtggatttgtgacggaacggatgactgtggtgacgggaccgat
gagctgcctgcgacctgcgcaaacaaaacctgcctgcaggcagagtatgactgcggcgct
cccatgcaccagtgtataccagacggctggcactgtgacggcaaagctgactgtaccaac
ggggctgatgagagtaactgcacggctaaacaatgcaagcctgacgagtttaaatgcgcc
agcggcgagtgtatatccacctccttcgtttgcgacaaggaaaacgactgccccgatggc
tcggatgaagtctcctgccccacacccacctgcagccctcagtccttccagtgcaacaac
tcggcgtgcattatgctcctgtggctctgcgacggagacgaggattgtaccgacggttcg
gacgagtggccgcagaactgcgtgggacggctgccggacaagactgcgcagcgctgcggc
gtccacgagttccagtgcgcaaacggggattgcgtccacagcaactggaggtgtgacgga
gacttcgactgcaaggatcgatcggacgaggtcaactgcagtcgtcctacttgtcgtcca
gacgagttccagtgtaatgacggcgcctgtatccacggcagccaccagtgtgacagaaac
aacgactgcagggacggcagtgatgagatcggctgccacacagaaagcgtatgtgaaggc
ccgaccaagttcaagtgtcgcagcggggagtgtatcagcatggagaaagtgtgcaacggt
cagagagactgcagcgactactccgacgagcctgtcaaagagtgcaacaaggatgagtgt
tcgactggaaatagcggctgctcccatttctgcatcgatctgaagattggcttcaactgc
tcctgccccgctggatacagcctgaagatggacaagaaaacctgtgaagacatcgatgaa
tgtgctgagccggacacttgcagccagatctgcatcaacctgcccggcagctacaagtgt
gattgtggggagggctacgagatcgaccctgcgagcaagacgtgcaagactgaatcaggc
accgtgcccaccctcttcttcaccaataaacacgaggtgaggaagatgacagtggaccgc
agcgagtacgtccgtctgatccccgggctgaagaacgctgtgtctctagacatggacatg
tctaacaagatgatcttctggtctgacctgactctgaagaaaatctacagctccaggatc
gatgtggccggtaactcctcttaccacactgtagtaattggcagtgggattgaggcccca
gaaggcattgcagtggattggatccatggcaacatctactggactgacggcgttttgaag
actatctctgtggcaacgacagacggcagcaagaggaagaccctgatcacagagaacctg
gacaagccaagagccatcgcagtcgaccccataaataacttcatgtactggacagactgg
ggtgacgaggccaagattgagaagagcggtttgaacggagtggaccgcgtcgtcttggta
aaagaaaacatcctgtggcccaatggcatcaccttagacatggtcaaccagcgtctgtac
tgggtggactccaagttgcacactctgtccagcatcgacgtgaacggagggacgcgacac
agtctcattatcagcgaggaaaagctcgcccaccccgtctctctgactgtgtttgaggac
aaagtcttttggaccgacataagcgccggtgctgtttttagtgccagccgcctgacaggg
aaagacatcaccacgctggcaacagacctgaatcagccagaggacatcgtactgtaccac
aacctcaagcagacaaacggtacaaacggctgcatcgagagtaacagcatgaacggaggc
tgtgagtttttgtgccttcctgcgcctgtgatcaaccagcactcacctaaattcacctgt
gcctgtcctgacaacatggccatgggacccgacatgaggaaatgtgtgacagcttcggtt
gaccagcccgccgaaatcaaaactgctgcaccgctcctgcccaaagattccaccaagacc
agcgcgcccaggcagaccactacagcaactatacctacaaccagagctaccaaacaaacc
acaactatctcaaccagcccgaccacacagcagtctgccgccaccggtcaaggtaacaga
ctggcagccctgcctgaagaagctccttcatccccccccatggctctctacgtcgtgttg
ccaataatcgtcatggccttggtcatctttggaggagcgttgctatggagacactggcgc
ctgaagaacaccaacaccatccactttgacaatcccgtgtaccagaagaccaccgaggac
gagctgcacatcttcaggaacaactctgagggctacgtttatcctcagaggcaaatgctg
agcatggacgacctggatgttgcataa
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