Larimichthys crocea (large yellow croaker): 104926945
Help
Entry
104926945 CDS
T04659
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104926945 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104926945 (mmp2)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
104926945 (mmp2)
Peptidases and inhibitors [BR:
lco01002
]
Metallo peptidases
Family M10
104926945 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
104926945
NCBI-ProteinID:
XP_010739211
UniProt:
A0AA51RHS1
LinkDB
All DBs
Position
VIII:complement(21531587..21545942)
Genome browser
AA seq
658 aa
AA seq
DB search
MGFPTIFSCRRIVLKVILVQFIAFQATYAAPSPIIRFPGDDTVPRTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVDIMKKPRCGVPDVANYNFFHRKPMW
QKKDISYRILGHTPDLDEEVINDAFFRAFKVWSDVTPLSFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKFGNADGEFCKFPFLF
MGTEYNSCTSQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
EKYDGCTTSGRDDGYRWCATTDNYDVDKSFGFCPETAMSTVGGNAEGSPCVFPFTFLGDS
YESCTSSGRSDGKMWCATTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTYTKDFRLSQDDIKGIQELYGVPTDKPLPPTQGPVTPMDICKEPVIFDAVAQIR
GETFFFKDRFLFRSVNFRSKPNGPMLVATYWPDLPSKIDAAYENPVEEKTVFFSGNEMWV
YKADELEKGYPKRLSSLDLPTDLQQIDAAFNFRKNRKTYLFSEDKFWRYDEEKKRMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYSYFFKGNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatttagctgtcgtcggattgttcttaaagtgattttggttcag
ttcatcgcttttcaagcaacatatgctgccccttcgcctattatcaggtttcccggagac
gatactgtcccaagaacagacaaagaagttgctctgcactatctgaataagttttatgga
tgcccacaagacagatgtaaccttatggtgctcaaggacaccctgaagaaaatgcaaaag
ttcttctctctgcaagaaactggagagattgatgccaaaactgtggatatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaattacaacttcttccacaggaaacccatgtgg
cagaagaaagacatcagttacagaatcctcggacacactccagatctggatgaggaggtc
ataaatgatgctttcttcagagccttcaaagtatggagtgacgttactccactctcattc
acacgcctgatggacggagaggctgacatcatgattaattttggccgcaatgagcacgga
gatggctaccctttcgacggcaaagatggcctcttggctcatgcctttgctccagggcca
ggaattgggggtgactcccactttgatgatgatgagcaatggacgttgggagatggccaa
gtggtgaaggtgaagtttggcaatgctgatggagagttctgtaagttccccttcctgttc
atgggcaccgagtacaacagctgtacatctcagggtcgtgacgatggcttcctgtggtgc
tcaaccacttacaactttgatgaagatggcaaatatggcttctgtccccatgaattacta
ttcaccctgggtggcaatgcagacggtgctccatgcaaattccccttcaccttccaggga
gagaagtatgatggatgcaccacctcaggcagggatgatggttaccgttggtgtgccacc
actgacaactatgatgttgacaaatcctttgggttctgccctgagactgccatgtccaca
gtgggaggaaacgcagagggaagcccctgtgtctttcccttcaccttcttgggagactca
tacgagtcctgcacctcatctggacgcagcgatggcaagatgtggtgcgctaccaccaag
agctatgatgatgaccgcaaatggggtttctgtcctgaccaaggctacagtttgttcctg
gtggcagcccatgagtttggtcatgctcttggcttggagcactctcaggaccctggagca
ctgatggcccccatttacacttacactaaagacttcaggctttctcaagatgacatcaaa
ggaatccaggagctctacggtgtcccgacagataagcctttgcctccaacccagggtcct
gtcactccaatggacatctgcaaagagccagttatttttgatgctgtagcacagatcaga
ggagagaccttcttcttcaaggacaggttcctgttcaggtcagtcaacttcagaagcaag
cccaacggccccatgctagtggccacctactggccagacctgccctccaagatagatgct
gcctatgaaaacccagtggaggaaaaaactgtgtttttctcaggcaatgagatgtgggtc
tacaaagcagatgagttggagaaaggctatcccaagaggctttctagccttgacctcccc
actgacctgcagcaaattgatgctgccttcaactttaggaagaacaggaagacgtacctg
ttttctgaggacaaattctggaggtatgatgaagaaaagaagagaatggaccctggcttc
cccaaacttattgctgattcctggaatggcatcccagatggcattgactctgccttcagt
cttaatggcattgattacagctacttcttcaaaggtaaccactatttcaaactggaagac
agcagcttgaagattgtcaagttgggtgaaatcacaaaggactggctcggttgttga
DBGET
integrated database retrieval system
