Larimichthys crocea (large yellow croaker): 104928434
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Entry
104928434 CDS
T04659
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04217
Necroptosis
lco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104928434 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104928434 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104928434 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104928434 (tnfaip3)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104928434 (tnfaip3)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C64
104928434 (tnfaip3)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
104928434 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
104928434
NCBI-ProteinID:
XP_010741022
UniProt:
A0A6G0HPC8
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All DBs
Position
III:complement(21354892..21367922)
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AA seq
824 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPATSGGLMHHLRGMHRFTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELLQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQPQ
KERLLKDYLLLIEIPVIGLGYDATRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGA
RIEGVVQTKGGGVQGVGVIGGSETEVSSRGARSSSPPSSSSGRGVVLSSPRSAPPTAPSL
SLYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNHGPPGAGTAATGLPGPNGAPIVP
HPAQGSGWTQWGGCETETERCSMCRQEVFRIFNGLCPPCMQRQQAPERGEPQQNNPRTEA
SSSAWSQARDAERPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQT
NHHLTPPPAPVQSRHGLEAGFQNPSRCRGPGCGAVGKAMLEGYCDKCYVKEQSARLNQVA
HRTPHSPPLVMRDRAVKPRSSQQSQTQTQTQCRRSGCSNVSPGCTDLCPECHTRGQGREA
GRRAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaattcctgtttgtctccaacctgctgaaggcg
gtgaagatccgtcagcgagtgcccaacgacgtggtgaagccggctaccagtggcggcctc
atgcaccacctgcggggtatgcaccgtttcacgctggagatgattgccatgaaccacttc
ccgcaggccttcagggaggtggtgcaggccgctatcttggaccgagccatgcaggcctca
ctggagcaggagaagaagctgaactggtgtcgggaggtgaagaagatggtgccattacgt
actaatggagatgggaactgtttgctccatgcagcctctcagtacatgctgggtgttcag
gacacagacctggtgcttcggaaagcccttcacggtgttttgaaagagacggacactggc
gtatttagagctcgattccaggcagagctgctccagtctcaggagttcacccagaccgga
ctccgatacaccaccatgaactgggaggaggagtgggaaaagattgtgaagatggcgtct
cctgtctccagtagcaatggcctccagtttgactctctggaggacattcacatcttcgtc
ctgtccaacattctccgcagacccatcatcgtcatcgcagaccaggtggtcaggagtatg
aaatctggctcctccatctctcctttgaatgtgggtgggatttatttgccactacactgg
ccgcccacagagtgctacaaatacccgatagtgctcggctatgactcccagcactttgca
cccctcatcaccatcaaagacagtggtccagagatccgagcagtaccgctgatcaacccg
ggacgtgggggctttgaggagctgaaggttcacttcctgatggagaaagaacagccacag
aaagagaggcttctcaaggactacctgctactgatagagatcccggttattggtttgggc
tacgatgccacaaggatcatcaacgctgctcggctggatgagggcaacctccctgaagac
atgaacctgatggaggactacctacaacttgtcaaccatgagtaccagcgctggcaggag
gacaaggagcaggcatgggccgcccagccacagcgcccaccacccttttctgtctcccag
ctctcccttatcgagatccgctgtgccacaccacgatgcaccttttatgtctctgtagac
acacaacctcattgccatgaatgctttgagaagcgacaggccactactggtggaggagcg
aggatagaaggggtggtgcagaccaaggggggaggagtacaaggggtaggagtgattggg
ggatcagagactgaggtgagctccagaggagcacgaagcagcagccccccatcctcctca
tctgggagaggggtggtgttatccagccctcgctcagcaccacccaccgctcccagcctc
agcctatacagtgaaactcatgccatgaagtgcaagacacctggctgcctcttcaccctt
agcgtggagcatgatggactttgtgagcgttgcttcaactccaggcaaaaccatggaccc
cctggagctggaacggctgctacaggactcccaggtcccaatggggctcctatagttccc
cacccagcccagggctccggctggacccagtggggtggctgcgagacagagacagagcgc
tgcagcatgtgcagacaggaggtgttcaggatattcaatggcctgtgccctccatgcatg
cagagacaacaggctccagagaggggggagccacagcagaacaaccccaggactgaggca
tcgtcttcagcttggagccaggccagggacgctgagcggccgtgtctcaccctaacccca
gggcacacctcagcctggcaagcccctctggcccgcccttgtaaaagatctggctgccaa
ttctttggcacgccagagaagttgggtttctgcactatttgctacgtagactatcagacc
aaccaccacctgacccctccccctgccccggtccagagccggcatggtttggaggcaggc
ttccagaacccatcacggtgtcgtgggcctgggtgtggtgcagttggaaaggcaatgctg
gagggctactgcgataagtgctacgtcaaagagcaaagcgcacggctcaaccaagtggca
catcgtacaccacactcccctcctctggtgatgcgtgaccgagcagtcaaacccagatct
tcgcagcaatcccagacccagacccagactcagtgccggcgaagtggctgcagtaatgtg
tccccgggttgcacagacctctgtccagagtgccatacgcgtggccagggcagagaggcg
ggcagacgggcgcaggcgcccaaggaaaagtccaagcagcggtgccggacgcagggctgc
gaccactacgccaaccaagagaaacagggctactgcaatgagtgtgaccacttcaaacag
atttaccgcggctga
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