Larimichthys crocea (large yellow croaker): 104928459
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Entry
104928459 CDS
T04659
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104928459
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104928459
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GFIT
Motif
Pfam:
Ion_trans
DUF1492
SieB
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
104928459
NCBI-ProteinID:
XP_027144833
LinkDB
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Position
XVI:21402087..21425621
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AA seq
1897 aa
AA seq
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MATLLPPPGTNAFRRFTKESLVEIERLAEERKKAAEVEGREEEESLAPNADLEAGKSLPL
IYGDPPPELLNTPLEDLDPFYKPQKTFIVITKGNTIFRFNAEPACYILSPFSLVRRGAIK
ILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGSF
TFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQS
VKKMVDVMILTVFALAVFALIGLQLFMGNLRQKCVRWPIETNGTAFEFFNATNAFNDTAS
FNNTMGVNDTIYSNNNFNFIEYIENTENHYYLEGSPDALLCGNSSDAGKCPEGYTCMKAG
RNPNFGYTSFDSFGWSFLALFRLMTQDYWENLFQLILRAAGKTYMLFFVVVIFLGSFYLI
NLILAVVAMAYDEQNEATRREAIEKEEEFQRLLEQLKNQEQAHLLGSRATLTSKKSLSHH
TTSELADDEQSLEHDEIVKDCNGRVIPRLIIRAPTIIKPLADNELRERSIGSVHSMLHLD
EPGLAQRRASALSVLTTAMEELEEAQRPCPPGWYKFADMFLKWDCCKPWVTFKNWVHFVV
MDPFVDLAITICIVLNTLFMAMEHYPMTPEFDYMLSVGNLVFTGIFTAEMFFKLIAMDPY
YYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISVDCELPRWHMNDFFHSFLIVF
RILCGEWIETMWDCMEVAGPGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAGDD
DGEMNNLQIAIGRITRGIDWLKAFVVRMVLRLLGRKPKEPDEDLTDDGDAKMECIEMNHL
DTSGDLKMADGIANCLVEGRPSGFIVDGELSGLNVPIALGESDFENLGEDDEDDEDTNDS
EFTEEKNNQLYLENAADEISMLETVKLMGALTDGDSSVCSTVDYQPPEPEPEEVEEEEED
PAEPEACFTDNCVKRWPCLTVDITEGKGKKWWNLRKTCFTIVEHDWFETFIIFMILLSSG
ALAFEDIHIERRRTIKIILEFADKVFTYIFIIEMLLKWTAYGFKTYFTNAWCWLDFFIVD
ISLISLFANWMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLV
CLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPMSEVNNRSDCMAVKEATQDARWVNVKV
NYDNVGKGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYMYFVIFIIFGSFF
TLNLFIGVIIDNFNQQKKKFGDKDIFMTEEQKKYYDAMKKLGSKKPQKPIPRPTNLIQGM
VFDFISQQFFDIFIMVLICLNMVSMMVETDNQSPEKEEFLFKLNVAFIIVFTGECVLKLF
ALRQYYFTNGWNIFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGA
KGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKGAGIDDIFNFETFGGS
IICLFEITTSAGWDGLLLPMLNKDFPDCDPDIENPGTDVKGNCGNPGMSMIFFCGYIIVS
FLVVVNMYIAIILENFNVAQEESGDALCEEDFEMFNETWEKFDLDGTMFIEYSQLSDFCD
TLQEPLRVAKPNRLRLIEMDLPLVIGDRIHCLDVLLAVTQMVLGDTVEMAAMRESIEAKF
ILNNPTSDSFAPITTTVRHKEEQMAAVVIQKAYRNHLLKRCIRHAAFLHHCKRMGRKDEG
EDPPEKEGMLAQRMGVLYGSNVDLAEEMEQAALETLASQQPPSPETLSHHTGAECDPEPL
EPNIMVVPVEITNEVLLHSAPSQYLLTLPANLRESIV
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgctccctcccccaggcaccaacgcgttccgccgcttcaccaaggaatcg
ctggtggagatcgagaggctcgcggaggaaagaaaaaaggccgcagaagtagagggacgt
gaggaggaagagtcactggccccgaacgctgatctggaggcgggcaagagtctgcccttg
atctatggagaccctccaccagagttgctcaacacacctctggaggacctggaccccttc
tacaaaccacagaaaacattcattgtgatcaccaaaggaaacacaatcttcaggttcaac
gctgaaccggcttgctacattctgagcccctttagtttggttaggagaggagccatcaaa
attctcatacattcattatttagcatgttcatcatgattacaattttgtcgaattgtgta
ttcatgacgatgagcaacccaccagcatggagtaaaactgttgagtatgtttttactggt
atctataccttcgaggcaacagtcaaagtgttgtcgagaggtttctgtgttggatctttt
acattccttcgagatccatggaattggctggatttcatggtgatcagcatggcatacatc
actgagtttgttgaccttggcaatgtgtcagccctcaggacctttcgtgtacttcgagcc
cttaaaacaattactgtgattcctggtttgaaaaccatcgtggccgctctgatccagtcg
gtgaagaaaatggtggacgtcatgattctgaccgttttcgctctcgctgttttcgccctc
attggcctccaactttttatgggaaatctgcgtcagaaatgtgtgcgatggcccatcgaa
acaaacggaactgcgtttgaattcttcaacgccaccaacgcgtttaatgacaccgcgtcc
ttcaacaacaccatgggggtcaatgatacgatatattccaacaataacttcaatttcatt
gaatatattgaaaacacagagaatcactattatttggaaggaagcccagatgccctactt
tgtggaaacagctctgatgctggaaagtgcccagaaggatacacatgcatgaaggctggg
aggaaccccaactttggctacaccagttttgactcttttggctggtccttcttggccctc
ttcagactcatgacccaggactactgggagaaccttttccagctgatcctgcgggcagct
ggaaagacatacatgctgttctttgtggtggttatctttctgggctccttctacctcatc
aacctcattctggctgtggtagccatggcttacgatgaacagaatgaggcaactcggcga
gaggccatagagaaagaggaggagttccagcggctactagagcaactcaagaatcaggaa
caggctcaccttcttgggagccgagccactctaaccagtaagaagtcgcttagtcatcac
accacgtccgagttggcagatgatgaacagagccttgaacatgacgaaattgtcaaggat
tgcaatggaagagtcatcccccgcctgataatcagagcgcccaccataatcaagcctctt
gcagataatgaactcagagagaggtcaatcggctctgtgcacagcatgcttcatctggac
gaaccaggcctggcacagagaagagcaagtgctctaagtgtgctcactacagctatggaa
gagttggaggaggctcagaggccgtgcccgcccggctggtacaagtttgccgacatgttt
ctgaagtgggactgctgcaagccgtgggtgacctttaaaaattgggtgcactttgtggtg
atggacccttttgttgacttggccatcaccatctgcatcgtgctcaacaccctcttcatg
gcgatggagcactaccccatgaccccagagtttgactacatgctctctgtggggaatctg
gttttcactggaatcttcacagctgaaatgttcttcaagctcatcgccatggatccctac
tactactttcaagtcggctggaatattttcgacagcatcattgtcactctcagtctggtt
gagttggggttggcaaatgtccagggactgtctgttcttaggtccttccgtctgcttcgt
gtcttcaaactagccaagtcctggcccacactcaacatgctgatcaagatcatcggcaac
tcagtgggagctttaggaaacctgactttggtgctggccatcatcgtctttatcttcgcc
gtggtggggatgcagctcttcggcaagagctataaggactgcgtgtgcaagatctccgta
gactgcgagctgcctcgctggcacatgaacgacttcttccactcgttcctcatcgtgttc
cgcatcctgtgtggggagtggatcgagaccatgtgggactgtatggaggtggccggacct
gggatgtgtttagttgtcttcatgatggtcatggtcattggaaatctagtggtgttgaac
ctcttcctggccctgctgctcagctcgttcagtggagacaacctctcagcaggggacgat
gacggcgagatgaacaacctccagattgccatcggcaggatcactcggggaatcgactgg
ctcaaagcattcgtcgttcggatggtcctgcggcttcttggcagaaagcccaaagagcct
gatgaggacctgacggacgacggggacgctaaaatggagtgtatcgaaatgaaccacttg
gacaccagtggggatttaaaaatggccgatgggatagctaattgtttggttgaaggccgg
ccctctggatttattgtagacggagagctcagcggtctcaatgtgccgatcgccctggga
gagtccgactttgaaaacctaggcgaggatgatgaggacgacgaagacaccaatgactct
gagtttacagaagaaaaaaacaaccaactttacctggaaaacgcagcagatgaaattagc
atgctggaaaccgtcaaactgatgggtgctttgactgatggggattcttcagtgtgtagc
acagtggactatcaaccacctgagcctgaaccagaggaagtagaagaagaagaagaagac
cccgcggagccagaggcctgcttcactgacaactgcgtgaagcgctggccgtgtctgacc
gtggatatcaccgaaggtaaaggcaaaaaatggtggaacctccgtaagacttgcttcacc
atcgtggagcatgactggtttgaaaccttcatcatttttatgatcctcctcagcagtgga
gctctggcctttgaagacatacacatagaaagacgccgaaccatcaaaattattctggag
tttgccgacaaagttttcacctacatctttatcatcgagatgctccttaaatggaccgcg
tatggcttcaagacctacttcaccaacgcttggtgttggttagactttttcatcgtagat
atttccctgattagtttattcgccaactggatgggctactccgaacttggaccaatcaaa
tccctcaggactctcagggcgttgaggcctcttcgagccctgtcgagatttgaagggatg
agggtggtagtgaacgctcttgttggagcaattccctccatcttcaacgtgctgctggtg
tgtctgatcttttggctcatcttcagcatcatgggggttaacctgtttgccgggaagttc
taccgctgcatcaacaccaccacggaggagcttttccccatgtctgaggtcaataacagg
agcgactgcatggccgtcaaggaagccacacaggacgcccgctgggtcaacgtcaaagtc
aactacgacaacgtagggaagggctacctgtctctgcttcaagtggcgacttttaaaggc
tggatggacatcatgtacgctgctgttgactcaagagaggtagaggaacaaccttcttac
gagatcaacctctacatgtacatgtacttcgtcatctttatcatctttggctctttcttc
acactcaacctcttcattggtgtcattattgacaatttcaaccaacagaagaaaaagttt
ggagataaagacatcttcatgactgaggaacaaaaaaagtactacgacgccatgaagaaa
cttggttccaagaagccacagaagccaattccacgtccaactaacctaatccagggaatg
gtgtttgacttcatcagtcagcagttttttgacatcttcatcatggtgctcatctgcctt
aatatggtgtccatgatggtggagacagacaaccaaagtccagagaaggaagaattcctc
ttcaaattaaacgtggctttcatcattgtcttcactggggagtgcgtgttgaagcttttt
gccttgcgacaatactacttcaccaacggatggaatatttttgatttcgttgtggtcatc
ttgtccatagctggtacgatgctctcagatataatcgagaagtactttgtgtcaccaact
ctgttcagagtgatcagactggcaagaataggcaggattctgcgtcttatcaaaggagcg
aagggcattcggacgcttctcttcgctctgatgatgtcccttcctgcccttttcaacatt
ggtctcctgctctttctcattatgttcatcttctccatatttgggatgtcaaattttgcc
tatgtcaaaaagggggccggaattgatgatatatttaattttgagacattcggtggaagc
attatctgcctgtttgagattacaacgtcggctggttgggatggacttttacttccaatg
ctgaacaaggactttccagattgtgatccagacattgagaacccaggcacagatgtaaag
ggcaactgtggcaacccgggcatgagcatgatcttcttctgtggctacatcatcgtctcg
ttcttagtggtggtcaacatgtatatcgccattatcttggagaacttcaatgtggctcag
gaggagagtggcgacgcactctgtgaggaagactttgagatgttcaatgagacttgggag
aagtttgacttggatggaacgatgttcattgagtatagccagctctcagatttttgtgat
accttgcaggagccattgagggttgctaagcccaaccgtcttcgcttgattgaaatggat
ctgcccctggtcatcggggacaggatccactgcctggatgtcttgttggcggtcacacag
atggtgctgggagacacggtggagatggcggcaatgcgggagagcatcgaggctaagttc
atcctgaacaaccccacctcagactcctttgcgccgattactacaacggtgcgccacaaa
gaagagcagatggctgctgtggtcattcaaaaggcttaccgcaaccacctactgaagcgc
tgcatacgccacgccgcttttcttcaccactgtaagaggatgggtagaaaggacgaaggt
gaagatccaccagagaaagaggggatgcttgcgcaaaggatgggagtgctgtatggcagc
aatgtggaccttgcagaggagatggagcaggctgcattagaaactctagcaagccaacag
cctcctagtcctgagacattgtcacatcacacaggggccgagtgtgatccagaaccgctt
gagccaaatatcatggttgtacctgtagaaattactaatgaggttttattacattctgcc
cccagccaatacctcttgaccctaccggcaaacttgagagagtcaatcgtataa
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