Larimichthys crocea (large yellow croaker): 104928828
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Entry
104928828 CDS
T04659
Symbol
cad
Name
(RefSeq) CAD protein
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00220
Arginine biosynthesis
lco00240
Pyrimidine metabolism
lco00250
Alanine, aspartate and glutamate metabolism
lco01100
Metabolic pathways
lco01240
Biosynthesis of cofactors
Module
lco_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
104928828 (cad)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
104928828 (cad)
00220 Arginine biosynthesis
104928828 (cad)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104928828 (cad)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
104928828 (cad)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
104928828 (cad)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
104928828 (cad)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
104928828 (cad)
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
104928828 (cad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
Amidohydro_1
ATP-grasp_3
Peptidase_C26
RimK
GARS_A
GSH-S_ATP
Motif
Other DBs
NCBI-GeneID:
104928828
NCBI-ProteinID:
XP_019121302
LinkDB
All DBs
Position
XI:complement(816011..834643)
Genome browser
AA seq
2234 aa
AA seq
DB search
MSKTATLVLEDGTTFTGLLFGADVSVSGEVVFQTGMVGYPEALTDPSYRCQLLTLTYPLV
GNYGIPNDEEGEFGLSKWFESSKIHAAALIIGELSDSPSHWSSVKSLDQWLKEQGVPGIQ
GIDTRCLTKKIREKGTMLGKLVVDGTPEDSVPFDNPDKRNLVQEVSMKEPRVFNPSGSLQ
ITVVDCGIKYNQIRCLAQRGARVTVVPWDHPLDSKDFDGLFISNGPGDPQLCQTTIDNVR
KVVCVENPKPVFGICLGHQLLSLVIGSKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGF
AVDPDALPKDWDVLFTNANDHTNEGIVHNTKPLFSVQFHPEHMAGPTDLVSLFDVFLDTV
KDHKDGNAAKTVKQRLMDRLTYPGSTKHEEVFRPRKVLILGSGGLSIGQAGEFDYSGSQA
IKALKEENIQTVLINPNIATVQTSKGLADKVYFLPLTPEYVTQVIKNERPDGVLLTFGGQ
TALNCGVELTKLGVLEKYKVKVLGTPVASIEMTEDRKIFVEKMEEIGEHVAPSEAALSVE
QAVAAAERLGYPVLVRSAFALGGLGSGFANNKDELTSLVTSAFAHTSQVLVDKSLKGWKE
IEYEVVRDAYDNCVTVCNMENIDPLGIHTGESIVVAPSQTLNDHEYNMLRNTAIKVIRHL
GIVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPQLK
NSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQK
ALRMVDENCVGFDHTIKPVSEEELQTPTDKRIFVLASAFRAGYTVDQLYELTKIDRWFLH
KMKNIADHERLLETYNQDESAMPPEVMRKAKQLGFSDKQIALAVQSTELVVRKLRHDWSI
LPVVKQIDTVAAEWPAFTNYLYLTYHGTEDDLSFADQHVMVIGSGVYRIGSSVEFDWCAV
GCITELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYERENPEGVILSMG
GQLPNNIAMSLHRQQCRILGTSPEFIDCAENRFKFSRMLDTIGISQPQWKELSDTESAVK
FCEKVGYPCLVRPSYVLSGAAMNVAYGDSDLEKYLSSAVAVSKEHPVVISKFIQEAKEID
VDAVACDGVVMAIAVSEHVENAGVHSGDATLVTPPQDLNQKTIERIKMIVHAIGQELQVT
GPFNLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATQAIVGEDVEPVGLMTGK
GIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNIL
LSIGSYKNKSELLPTVQALESLGYDLYASLGTADFYTEHGVKVKAVDWPFEEEDSDCPTK
EKQRSIMNYLEENHFELVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCTK
LFVQALRQIGRTPPVKTHIDSMTSQTLVRLPGLIDVHVHLREPGATHKEDFSSGTAAALA
GGVTMVCAMPNTSPAITDANTLALVQKLAKAGCRCDYALYVGAASDNAAILPSIAGQAAG
LKMYLNDTYSTLKMDNVSLWMEHFEKWPKQMPIVAHAEKQTVAAILMVAQLYQRPVHICH
VAKKEEILIIRAAKQKGIQVTCEVAPHHLFLCEENVPQIGDGRAQVRPMLGTNEDMEALW
ENLDIIDCFATDHAPHSVEEKNSDHPPPGYPGLETMLPLLLTAVSDGRLTLDDIIKRLYD
NPRRIFNLPVQDNTYVEVDLEQEWVIPQAMQFTKSKWTPFQGLKVKGKVRRVVLRGEVAY
IDGQVLVPPGYGEDVKRWPTAPTLPAEPVKESPRTPEHPRPTPPREGPVRTRAQSPRRPG
GERGYLLPPRIHRSSDPGLPPEMLMLPPTSTGDGYSHPPPLSRLLSPQSGPGQIPAGQLS
HFQLSPLLHTLVGQHILSVRQFSKEQMSHLFNVAHTLRLMVQKERSLDILKGKVMASMFY
EVSTRTSSSFAAAMQRLGGSVVHFSESTSSTQKGESLADSVQTMSCYADVLVLRHPTPGA
VESASRHCRKPVINAGDGVGEHPTQALLDVFTIREELGTVNGMTITMVGDLKHGRTVHSL
AKLLTQYRITLRYVAPKNLHMPAEIISYVASKGIKQEEFDSIEEALPETDVLYMTRIQKE
RFASEEEYKACFGQFILTPHIMTVAKKKMVVMHPLPRVNEISAEVDTDPRAAYFRQAENG
MYIRMALLATVLGR
NT seq
6705 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagacggcaaccttggttctggaggacgggacgacgttcacgggcctcctgttc
ggtgccgatgtgtcggtgtcgggagaagttgtgtttcagacgggcatggtgggctacccc
gaggctctgaccgacccatcgtaccgctgccagctgctgaccctcacctaccctctggtc
ggcaactacggcataccaaacgatgaagagggggagttcggactgagcaagtggtttgaa
tcgtcaaagatccacgctgcagccctgatcattggagagctgtctgacagtcccagtcac
tggagttcagtcaagtctctggaccagtggctcaaagagcaaggcgttcctggaatacaa
ggcattgacacccgctgcctgaccaagaagatcagagagaagggcaccatgttggggaag
ctggtcgtggacgggactcccgaggacagcgttcccttcgataacccagacaagaggaac
ctggtccaggaagtctccatgaaggagcccagagttttcaaccccagcggcagtttgcag
atcacagtggtggactgcggcatcaaatacaaccagatccgctgcctggctcagagagga
gctcgcgttaccgtcgtaccctgggaccatccgctggacagcaaagattttgatggtttg
ttcatcagcaacggccccggtgatccccagctctgccagacgaccatcgacaacgtgagg
aaggtggtctgcgtggaaaaccccaagcctgttttcggcatttgcctcggacaccagctg
ctgtctttagtcatcgggtcgaagacctacaagatgaagtacggtaaccgtggccacaac
cagccgtgcatccacaaagggacagaccgctgcttcatcaccagtcaaaaccacggcttc
gccgtcgaccccgacgccctgccgaaggactgggacgtcctcttcaccaacgccaacgac
cacaccaatgagggcatcgtgcacaacaccaaacctctgttcagcgttcagttccacccg
gagcacatggccggtccgactgacctggtcagcctgtttgacgttttcctcgacaccgtg
aaggaccacaaggacggcaacgctgccaaaaccgtgaagcagcgtctaatggaccgcctc
acctacccgggttccacgaagcacgaagaggtattccgacccaggaaggtcctcatcctg
ggttctggaggactgtccatcggccaggcgggagagttcgactactccggctctcaggct
attaaggctctcaaggaagagaacatccagaccgtgctgatcaacccgaacatcgccacc
gtccagacctccaaaggcctggctgataaagtctacttcctgccgctcacgccggagtac
gtcactcaggtgataaagaacgagcgtccggacggcgtgctgctgaccttcggcggtcag
acggctctgaactgcggcgtggagctgaccaagctgggcgtgctggagaagtataaagtg
aaggtgctgggaacgccggtggcttccatcgagatgaccgaggacaggaagatctttgtg
gagaagatggaagagatcggcgaacacgtggctcccagcgaagcggcgctgtccgtggag
caggccgtggcagctgctgagcgtctaggctaccccgttctggtccgctcggcgttcgcc
ctcggcggtctgggctccggcttcgctaacaataaagacgagctcacctctctggtgacg
tcggccttcgcccacacctcgcaggtcctggtggacaaatccctgaaaggctggaaggag
atcgagtacgaggtggtccgtgacgcctacgacaactgtgtcaccgtgtgtaacatggag
aacatcgaccctctgggcatccacaccggagaatccatcgtggtggcgcccagtcagacg
ctgaacgaccacgaatacaacatgctgaggaacacggccatcaaggtcatccggcacctt
ggcattgtgggcgagtgtaacatccagtacgccctgaacccggagtccgaacagtactac
atcatcgaggtgaacgcccgtctgtcgcggagctcggccctcgccagtaaagcgacgggc
tatcctctggcttacgtcgcagctaaactcggcctggggatcccgctgccgcagctcaag
aactccgttaccaactcgaccacagcgaacttcgagcccagtttggactactgcgtggtg
aaggtgcctcgctgggatctgagcaaattcctcagagtttccaccaagattggcagctcc
atgaagagcgtcggtgaggtgatggcgatcggccgcagctttgaggaggccttccagaaa
gctctgaggatggtggatgagaactgtgtcggctttgaccacaccatcaagcccgtctct
gaagaggagctgcagactcccacagataagcgcatcttcgttctggcgtcggccttcaga
gccggctacacggtggaccagctgtacgagctcaccaagatcgaccgctggttcctgcac
aagatgaagaacatcgccgaccacgagcggctgctggagacgtacaaccaggatgagagc
gccatgcctcctgaggtgatgcggaaggcgaagcagctgggcttctcagacaaacagata
gcactggctgtgcagagcacagagctcgtcgtgaggaagctgcgtcacgattggtccatc
ctgcccgtggtgaagcagatcgacacggtggcggccgagtggcccgccttcacgaactac
ctgtacctgacgtaccacggcaccgaggacgacctgagcttcgccgatcagcacgtcatg
gtgatcggctcgggcgtgtaccgcatcggcagcagcgtggagttcgactggtgcgcggtc
ggctgcatcacagagctcaggaagatgggctataagacgatcatggtgaactacaaccca
gagacagtaagcacggactacgacatgtgtgaccgactctactttgacgagatctccttt
gaggtggtgatggatatctacgagagggaaaacccagagggagtgatcctctccatgggc
ggccagctgcccaacaacatcgccatgtcgctgcaccgtcagcagtgccgcatcttggga
acttcgcccgagttcattgactgcgccgagaaccggttcaagttctcccgcatgctggac
accattgggatcagccagccgcagtggaaggagctgtcggacaccgagtctgctgtgaag
ttctgtgagaaggtgggttatccctgcctggttcgtccttcctacgttctcagcggagca
gccatgaacgtcgcctacggtgacagcgacctcgagaaatacctgagcagcgctgtcgcc
gtgtccaaggaacaccctgtcgtcatctctaaattcatccaggaggccaaggagatagat
gtggacgctgtcgcctgtgacggtgtggtgatggccatcgcggtgtccgaacacgtggag
aacgctggcgttcactccggcgatgccacgctcgtgacgccgcctcaggatctcaatcag
aagacgatagagaggatcaagatgatcgtccatgccatcggacaggagctgcaggtcacc
ggaccgttcaacctgcagctgatcgccaaggacgaccaactgaaggtgatcgagtgcaac
gtccgagtctcccgctccttccccttcgtatccaagactctcggcgtggacctcgttgcc
ctggcgacgcaggccatcgtgggggaggacgtggagcccgtgggcctgatgacagggaaa
ggtatcgtgggagtcaaggttcctcagttctcgttctctcggttggccggagctgacgtg
gtgctcggggtggagatgacgagcaccggtgaggtggcctgttttggggagaacagatac
gaagcttacctcaaagcgatgctctcgacgggcttcaagatcccaaaaaagaacatcctg
ctctccatcggcagctacaagaacaagagtgagctgctgcccaccgtgcaggcgctggag
tctctgggttacgacctgtacgccagtctgggaactgcagacttctacacagaacacgga
gtcaaggtgaaggcggtggattggccgttcgaggaggaggacagcgactgtcccaccaaa
gagaagcagcgcagcatcatgaactacttggaggagaaccacttcgagctggtcatcaac
ctctccatgaggaacagcggcggtcgcaggctctcctccttcgtcaccaaaggctacagg
acgagacgcatggccatcgactactccgtcccgctcatcatcgacatcaagtgcaccaaa
ctcttcgtccaggctcttcgtcagattggacggactccgcctgtgaagactcacatcgac
agcatgacatcccagacgctggtccgtctgcccggtctgattgatgttcacgttcacctt
cgtgaacctggagccacacataaggaggacttctcctccggtacagcagcagctctggcg
ggaggcgtgaccatggtgtgtgcgatgcccaacacttcccctgccatcaccgacgcaaac
accttggccctggtgcagaagctggccaaagcgggctgtcggtgtgactacgctctgtac
gtgggcgctgcttcagacaacgccgccatcctgccgtccatcgcgggccaggccgccggc
ctgaagatgtacctgaatgacacgtactccaccctcaagatggacaacgtctccctgtgg
atggagcactttgagaagtggcccaagcagatgcccatcgttgcccacgccgagaagcag
acggtcgccgcgatcctcatggtggctcagctctaccagcggccggtccacatctgccac
gtggccaaaaaggaggagatcctcatcatccgagcggcgaagcagaagggcatccaggtc
acatgcgaggtggctcctcatcacctcttcctctgcgaggaaaacgtgcctcagatcggc
gacggccgagcgcaggtccgacccatgctgggaaccaacgaggacatggaggctctgtgg
gaaaacctggacatcatcgactgcttcgccacggaccacgctcctcactctgtggaggag
aagaacagcgatcatcctcctccgggttaccccggcctggagacgatgcttcctctgctg
ctgacggcggtcagtgacggacgtctgactctggacgatatcatcaagcgtctttatgac
aacccacgccgaatcttcaacctgcctgtccaggacaacacctatgtggaggtggacctg
gagcaggagtgggttattcctcaggccatgcagttcacaaagtcgaagtggacgccgttc
cagggtctgaaggtgaagggtaaagtccgccgtgtggtcctgcgaggagaggtggcctac
atcgacggccaggtgttggtccctccaggttacggtgaagacgtgaagcgatggcccacc
gctccgacgcttcccgccgaacccgtcaaagaaagcccgaggactccagagcacccacgt
ccgactcctccccgggaaggtccggtccgaacccgagcacagagcccccgacgacctgga
ggagagagaggttatctgctgccgcctcgcatccaccgctcctctgatcccggacttcca
ccagagatgcttatgctgccaccgaccagcactggagacggttacagccaccctccccct
ctgtccaggctgctgtcccctcagtcgggaccaggacagatacccgctggacagttgtcc
cacttccagctctctccgctgcttcacacgctggtcggccagcacatcctgtctgtgcgg
cagttcagcaaagagcagatgtctcatctgtttaacgtcgcccacactctgcgtctgatg
gtgcagaaggaacgaagcctggacatcctgaagggtaaggtgatggcgtccatgttctac
gaggtcagcactcgcaccagcagctccttcgcggcggccatgcagcgtctcggcggctcc
gtcgtccacttcagcgaatccacgtcgtccacgcaaaaaggagaatctctggccgactct
gttcagaccatgagctgctacgccgacgttctggtgctccgacacccgacgcccggagcc
gtggagagtgcgtcacgtcattgccgtaagcccgtgatcaacgctggagacggtgttggg
gagcatccgacccaggccctgctggacgtcttcaccatcagagaggagctgggcactgtg
aacggcatgacgataactatggtcggagatctgaagcacggccgcacggttcactccctc
gccaagctgctcacgcagtaccgcatcacgctgcgctacgtcgctcccaagaacctccac
atgccggcggagatcatcagctacgtggcctcgaagggcatcaaacaggaggagttcgac
agcatcgaggaggctctgcccgagaccgacgtcctctacatgacgaggatccagaaggag
aggtttgcatccgaggaggagtacaaggcttgtttcggacagttcatcctcacccctcac
atcatgactgtagccaagaagaagatggtggtgatgcatccgctgcccagagtcaatgaa
atcagtgccgaggtggacaccgacccgagggcggcgtatttccgtcaggcggagaacggc
atgtacatccgaatggccctgctggccaccgtactgggcagatag
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integrated database retrieval system
