Larimichthys crocea (large yellow croaker): 104929151
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Entry
104929151 CDS
T04659
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04144
Endocytosis
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104929151
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104929151
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104929151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104929151
04121 Ubiquitin system [BR:
lco04121
]
104929151
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104929151
Membrane trafficking [BR:
lco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104929151
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
HECT type E3
104929151
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
104929151
NCBI-ProteinID:
XP_027144771
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Position
XV:complement(3111400..3130972)
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AA seq
887 aa
AA seq
DB search
MATVAKSGTSNGYPMKAQLQIIVLSAKLKENKKNWFGPSPYVEVTVNGQSKKTEKCNNTH
SPKWKQPLTVIVTPFSKLVFRVWSHQTLKSDVLLGMATLDVSDTLKSNDMKISEVVQTLQ
LCADRDQSDVVGDLSVCLDGMTVDPEMFATAEADHHSKLNGESQPNGEHAIRPSRDSSPA
VDSAEHRSSPSGRRSATNTGSPSVSSGGSRPLRPPRPSRPPPPTPRRPTSSPASSSNGSA
PADGSDGQSGSDTPVRTPSSAPPPAPDSSPSAGSDRNSTSASSSGAAATRQPTSSVTPAV
TPRVPAVNAGPLPPGWEQRVDLNGRLYFVDHVEKRTTWERPEPLPAGWERRVDQMGRVYF
VDHITRTTTWQRPTMETVRNYEQWQHQRSQLQGAMQQFNQRFIFGVQDQVSATQNKEFDP
LGPLPHGWEKRTDSNGRVYFVHHPTRTTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYF
VDHNRRTTTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLAMPQHIKINVSRKT
LFEDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAG
KDNYCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKD
LESIDPEFYNSLMWIKDNDIEECGLEMFFSVDKEILGEISTHELKPGGGDIQVTEENKEE
YIRLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLTDWQRN
TIYRHYARSSKQIMWFWQFIKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCI
EKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtcgccaagtcgggcacttccaacggttaccctatgaaagcacagctacaa
atcattgtgctatcagcaaaactaaaagagaacaagaaaaactggtttggtcccagtccc
tatgtggaagtgacagtgaatggccagtccaagaaaacagagaaatgcaacaacacccac
agccccaaatggaaacagccgctcactgtgatcgtgacaccgttcagcaaactggtgttt
cgagtgtggagccaccagaccctcaagtcagacgtgctgctgggcatggccacgctggac
gtcagcgacacgctcaagtccaacgacatgaaaatctctgaagtggtgcagaccttacag
ctgtgcgcagacagagaccagtccgatgtggtcggagatctctctgtctgcctggacggc
atgaccgtcgaccccgagatgtttgccacggctgaggccgaccatcacagtaaattaaac
ggggaatcacaaccaaatggggaacatgccataagaccgagtcgggacagctctccagct
gtggacagtgcagagcacaggtcttctcccagtggccggaggtcagcgaccaacacaggg
tctccctctgtgtcatcaggtggctcgaggcctcttcgaccacccaggccctccagacct
cctcctccaaccccccgcagacccacctcttcaccagcatcttccagcaacggctctgca
ccagccgatggcagcgatggtcagtcgggttctgatacaccagtgcgaacaccatcctct
gcacccccaccagccccagactcaagtccatcagcaggctcagacaggaactccacatca
gcctccagctctggagctgcagcaaccagacagccaaccagcagcgtcacccctgctgtc
actcccagggtccccgctgtgaacgctggaccgttgccccctggttgggagcagagggtg
gatctgaatggcaggctgtatttcgtcgatcatgtggaaaagaggacaacgtgggaacgc
cctgaaccactgcctgctggctgggagcgtcgtgtcgaccagatggggcgggtctacttt
gtcgatcacatcacgcgaaccaccacatggcaacggcccacaatggagacggtgcgtaat
tacgagcagtggcagcaccagcgcagccagctacagggcgccatgcagcagttcaaccag
aggttcatattcggggtacaagaccaggtctcagccactcagaataaggaatttgatcct
ctagggcctctgccacatggatgggagaagagaacggactcgaatggcagagtttatttt
gtacatcaccctacacggacaacacagtgggaggacccacgaacacaggggttgctgaac
gagaaaccacttccagagggctgggagatgaggttcactgtagatggcattccgtacttc
gtagatcacaacaggagaacgaccacctacattgaccctcgcactggaaaatcctcactt
gaaaatggacctcagatcacttatgttcgagacttcaaggccaaagtgcaatacttcaga
ttctggtgccagcaactggcaatgcctcaacacattaagatcaacgtatccagaaaaacc
ctgtttgaagactccttccagcagataatgagcttcaacgctcaagatctgagaaggaga
ctatggataatcttccctggagaagaaggcctcgactacggaggcgttgcaagggagtgg
ttcttcctgctgtcccatgaggttttgaacccaatgtactgcctgtttgaatatgccggt
aaagataactactgtctccagatcaaccctgcctcctacatcaaccctgaccacctcaag
tatttcaagttcataggacgcttcatcgccatggctcttttccacggcaagttcatcgac
actggtttctcgctgccattttacaagcgtatcctgaacaagcctttggccctcaaagat
ctggagtcaatagacccagagttctacaactccctcatgtggatcaaggataacgacatc
gaggagtgcgggctggagatgttcttctccgttgacaaagagatcctgggggaaatctcc
actcatgagctgaaaccagggggaggagacatacaagtcacagaggagaacaaggaggag
tatatcaggctggtagcagagtggaggctgtccagaggagtggaagagcagacacaggct
ttctttgaaggcttcaacgaggtcctccctcagcagtacctgcagtactttgacgctaaa
gaactcgaggtgatgctgtgcggcatgcaggagatcgacctcacagactggcaaagaaac
accatctacagacactatgctcgaagcagcaaacagatcatgtggttctggcagtttata
aaggagatggacaatgagaagaggatgaggctgctgcagtttgtcaccgggacctgtcgc
ctgcctgtaggaggctttgccgacctcatgggaagcaacggtccccagaagttctgtatt
gagaaggtgggaaaagaaaactggcttcctagaagtcacacatgcttcaacagattggat
ttgccaccctacaagagctacgagcaactaaaggagaagctgatgtttgccatcgaggag
acggaaggcttcggacaggagtga
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