Larimichthys crocea (large yellow croaker): 104929589
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Entry
104929589 CDS
T04659
Symbol
cxxivh9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104929589 (cxxivh9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104929589 (cxxivh9orf72)
Membrane trafficking [BR:
lco04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
104929589 (cxxivh9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
104929589
NCBI-ProteinID:
XP_010742453
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All DBs
Position
XXIV:complement(16354174..16367725)
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWAPKGDQVMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKTHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEEDIPPDRVIHTDETFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALALLKYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIVMAFAEKLRAGLHSFVFGKPFYTSMHERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgggtgtccaccccagtcccctgctgtggcaaagtccgaggtagcagtagag
ggagaatgcccgctgctggctgccacctttgcctactgggacaacatcctgggtccacgg
gtgcgccacatctgggcaccaaaaggtgaccaggtgatgttcctcagcgatggagaggtc
acatttttggccaatcatacactgaatggggagattctgcgtagtgccgagtgtggtgcc
gtggatgtgaagttctttgttctggcggaaaagggcgtcatcattgtgtctctgatcttc
gatggcgagctgaagggggacaagaacacgtgcgctttgtccatcatcctccctcagaca
gagctggccttctacctgcctctacacaccatctgtgtggagaggctgaagcatgtcatc
cgcaaaggccgcatttggatgcagaagggctacaacattatctcagtgctgagcttggag
attgtacctatcatggagctgttggcctctatgaagacacatagtgtgccggaagatatc
gatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctacagacttgcggctgctcaatagtggttggaagc
aacccagagaaagtaaataagatcgtgcggactctctgcctctttctcaccccggccgag
aggaagtgctctcgcctctgcaaagccgactcttccttcaaatacgacacgggcctgttt
gttcagggtctgcttaaggactccacaggcagcttcgtcctgcccttccgccaggtgctc
tactcgccttacccgaccacgcacattgacgtcgacatcaacacagtcaagcagatgccg
ccgtgccacgagcacacgtacaaccagcggcgctacatgcggtctgagctaagtgcgctc
tggaagacggacagtgaggaggacattccccctgacagagtcatccacacagatgaaaca
ttcactcctgacctgaatatatttcaagacgtcatgcataaagacactttggtgaagtca
tttatagatgaggtgttcatgctgaagccaggcctgtccctgcggagcacatatctggcc
cagttcctgctgttactccacaggaaggccctcgcgctgctcaagtacatcgaggacgaa
acgcaaaaagggaagaagccgtttcgatccctccgcaatttgaagacggacctggacctg
acagtagaaggagacctcaacatagtaatggccttcgctgagaagctgagggcaggactg
cactcatttgtgtttgggaagccattttacacgagcatgcatgaacgagatgtactcatg
agcttttga
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