Larimichthys crocea (large yellow croaker): 104931307
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Entry
104931307 CDS
T04659
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104931307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104931307
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
104931307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
NADH_Oxid_Nqo15
Motif
Other DBs
NCBI-GeneID:
104931307
NCBI-ProteinID:
XP_027147204
LinkDB
All DBs
Position
XIX:complement(10877714..10936498)
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AA seq
1435 aa
AA seq
DB search
METSTSRAAEKKDKMDGSGFSDLPKKPSPSETRGPHHIFPTFHTPIPIDMRHHEGRYHYE
PHALHAMHGPAGLAGSPVISDISLIRLSPATMATGDSPFSPPHPYVNPHMEHYLRSVHGS
PTLSMISAARGLSPADLAHEHLKERSLFGLPPPPGASPAEYYHLMASHRSPYGELLMQGA
GATAGAHLSDYITPIDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVA
YINNSRSSSAASSSYGHLSVGGLSPSFPFPHPINPMAYQQLLSQQRGLSAFGHTPPLIQP
PPAFSSRQPGLGLSSLPASAHNSDLSSKNLSADSAVSSTVDPIITKRSKVKMEAEGLRPL
SPCSPNHHGSLLDLKDDVDRDDCKQEPEAVYETNCHWEGCSKEYDTQEQLVHHINNDHIH
GEKKEFVCRWEDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCAKAYSRLENLKTHL
RSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKH
VKTVHGPEAHVTKKQRSDLPPRPPAPRENGENETGNRERIQREDKISDSSSPRGMDDYLH
VKSIKTETSVMYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAAHSGGSLGDLSTLDDLPF
VESLGCEDSSGGVAVVGLHFRKQFCTSQRLEHLKKEKLKTVRDSCRWASSTTPPVLGTKL
PPIPASGSLLESPMGGGPMSFPGSGLGDLSSGKTTLLENLSERRDSTSSTLSSVYTLSRR
SSGISPCYSSRRSSQASQFGANRPSNVSSADSYDPISADISRRSSQASQCGGNNGGAGGY
GGRGLPSPLSLTPAQHYHLKAKYAAATGGAPPTPLPYMDRMFKTHTALYSDSQETSTTNK
VPSRQYSSYTTRSLMPHEVPANIPRRASDPVRRVALDYSSQQQMQRYNSMGTLSGGVSMQ
PHPPPAADRQHLSQQGCPRQNGSPYRHPYSLRPPSISENVTMDMMAGDIPEEDLMLPDLS
TNRVSINQDFQGTPNLQQQSRYQRRMAVVNTEMNLPSQVLATSSMSPGQQRQMCPSSPRD
SKANNVSLGPMEASQHYSKLQVRGNLAVLQQNQNFGSFHNNSNQQMIQNLVNSTQQICKK
LNPEPGANCFQQQRFQQSSNLNDGISSQYRFNGGISPYDTNGNSTYPACNNTAAVSGSML
SPTCKQEPVDMEIVGMHIADAGFQPVQVKIEDCDGPVMISDQQNCNMQTGNQSHLQPRPP
TVPKSLNRHPSGPKVMQQTRHPSNANLEVTLHCSDSSDDNAVYYTGQIQVFEPNGTLDHH
VSPVVTVPPFEIDAVSPSSGNNQASRTVDCNAALEQAQIDFDIMLDDGDHSSLMSGTLSP
GLLQSLSQSSSRLTTPRNSVTLPSVPVATGNMAIGDMSSLLTALAEESKFLNLMS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggagacttccacatcgagagccgccgagaaaaaggacaaaatggacggcagcgggttc
tccgacctcccgaagaaaccgtcgccctcagagacgagaggcccccaccacatcttcccc
accttccacacgccgatcccgattgacatgcgtcaccacgagggacgataccactacgag
cctcacgcgctgcacgccatgcacggccctgcaggtttggctggcagccccgtcatctcc
gatatctccttgatccgcctctcccccgccaccatggcaaccggcgactctcccttcagc
ccgcctcacccgtacgtcaaccctcacatggagcactacctgcgctccgtgcacggcagc
ccaaccctgtccatgatctcagccgccagaggactgagcccagccgacttggcccatgag
catttaaaagaacgcagcctgttcggacttcctcctcctcccggggcgagcccggctgag
tattaccacctgatggccagccaccgcagcccctacggtgagctgctcatgcagggggcc
ggggccacggcgggggctcacctgtccgactacatcacccccatcgacgtgtcgcggttc
tccagccccagactgacgcccaggctgagcaggaagcgggctctgtccatctcgccgctg
tctgacgccagcatcgacctccagacgatgatccgcacctcgccaaactcgctggtcgcc
tacatcaacaactcgcgctccagctcggccgccagcagctcctacggacacctgtcggtc
ggaggcctcagcccgtccttccccttccctcatcccatcaaccccatggcctaccagcag
ctcctctcccagcagcgagggctcagcgccttcggccacacgccgcctctcatccagcct
ccgcccgccttctccagccgccagccgggcctcggcctctcctctctgcccgcctccgcc
cacaacagcgacctgtcgtccaagaacctcagcgctgactcggccgtcagcagcactgtc
gacccgatcatcaccaaaaggtcaaaggtgaagatggaagcagagggattgaggccgctg
tctccgtgttcaccgaaccatcacggcagcctgctggacctgaaggacgacgtggaccgg
gacgactgtaagcaggagcccgaggccgtctacgagaccaactgccactgggagggctgc
agcaaggagtacgacacgcaggagcagctggtccatcacatcaataatgaccacatccac
ggagagaagaaggagtttgtgtgccgctgggaggactgttcgcgggagcagaagcccttc
aaagctcagtacatgctggtggttcacatgcgccgacacacaggggagaaaccacacaag
tgcacgttcgagggctgtgctaaggcctactcccgtctggagaatctcaagactcatctg
cgctcgcacactggcgagaaaccgtacgtctgcgagcacgaaggatgcaacaaagccttc
tccaacgcctcggaccgagccaaacaccagaaccggacacactccaacgagaaaccgtac
gtttgtaagatccccggctgtacgaagcgctacacggatcccagctctctcaggaagcac
gtgaagacggtccacggcccggaggcccacgtcaccaagaagcagcgcagcgacctgccg
ccgaggccgccagcgcccagggagaacggcgagaacgagacggggaacagagaaaggatc
cagagggaggataagatatcagacagcagctcccccagaggcatggacgactacctgcac
gtcaaatccatcaagacggaaacctctgtgatgtatcagtccagccctggcggtcagtca
tcatgtagcagcgaaccatcaccacttggcagtgccaccaacaatgacagtggagtagaa
atggcggcgcacagcgggggaagcctgggggacctcagcaccctggacgacctgcccttc
gtggagtccttgggctgtgaagattccagcggtggggtggcggtggtgggtctccacttc
cgaaagcagttttgcaccagccagcgcctagagcacctgaagaaggagaagctgaagaca
gtgagggactcgtgtcggtgggccagcagcacaacacccccggtcctcggcaccaagctc
ccacccataccagcgagtgggtccctcctggagagtccaatgggtggtggtccgatgtcc
ttccctggttccggcttgggtgatctgagctctggcaaaacaacgctgctggaaaacctt
tccgagcgccgtgacagcacctccagcaccctgagctcagtttacaccctcagccgccgc
tcctcaggcatatcgccttgctactccagtcggcgctcaagccaggcctcgcagttcggt
gccaaccgccccagcaacgtcagctctgccgactcctacgaccccatctctgccgacatc
tcacgccgttccagtcaggccagccagtgtggaggaaacaacggaggagcaggagggtac
ggaggaaggggcttacccagccccctcagcctgaccccggcccagcactaccacctcaag
gcgaaatatgctgctgctactggaggtgcaccgcctacacctcttccatatatggaccga
atgtttaagacccacacagccctgtacagtgactcccaagaaacctccaccaccaacaaa
gtaccttccagacagtacagcagttacaccacgcggagtctgatgccccatgaggtcccg
gctaacatcccccgcagagccagtgacccagtgagacgagtggctctagattattccagc
cagcaacaaatgcagcgctacaacagcatgggcacgctgagtggaggcgtgagcatgcag
ccccatccacctcctgcagcagataggcaacatttatcccagcaaggctgcccgcgacag
aatggtagtccctaccgccacccgtacagcctgcgaccgcccagcatttcagagaatgtt
acaatggacatgatggcaggcgacatccctgaggaagacctgatgctgcctgacctaagc
actaacagagtgtcaatcaatcaagatttccaaggaacccccaatctccagcagcagtca
cgctatcagagacggatggccgtggtgaatactgaaatgaacttgcccagtcaggttctg
gccacgtccagcatgagtccagggcagcaacgacagatgtgcccatcttcaccgagggac
agtaaggccaacaacgtctctttgggacccatggaagccagccagcactactccaaacta
caggtccgagggaacctggctgtcctccagcaaaaccagaactttggatcttttcacaac
aactctaaccagcagatgattcaaaaccttgttaacagcacgcagcagatatgcaagaag
ctgaatcctgaaccaggagcaaactgtttccagcagcagagattccagcagtcgtccaat
ctcaatgacggaattagttctcagtacaggttcaacggaggcatcagcccctatgacacg
aatggtaacagcacgtatccagcttgtaataacacagcagcagtcagcggtagcatgctc
agccccacgtgcaaacaggagcccgttgatatggagattgttggcatgcacattgccgat
gctggatttcagcctgtgcaggttaaaattgaggactgtgatggaccagtcatgatttca
gatcagcagaactgtaacatgcaaactgggaatcagagccacctccaaccaagaccacca
acagtacctaaatctctaaacaggcacccttcagggccaaaggtgatgcagcaaacaagg
caccccagtaacgctaacctggaggtcactcttcattgcagtgacagctctgatgacaat
gccgtgtactacacagggcagattcaagtgtttgagcccaacgggaccttggaccatcat
gtttctcccgtggtgactgtgcctccttttgaaatcgatgcagtgtctcccagttcaggc
aataaccaagcgtccaggactgtggactgcaatgcagcgctggagcaggcgcagatagac
tttgatatcatgctggacgacggggatcactccagcctcatgtcgggaactttgagtcca
ggtctgctccagagcttgtcccagagttcctctcgcctgacgacgcccaggaactccgtc
acgttgccctctgtgccggtggcgacggggaacatggccatcggggacatgagctcgtta
ctgactgctctggcagaagagagcaagttcctcaacctgatgtcttag
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