Larimichthys crocea (large yellow croaker): 104931396
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Entry
104931396 CDS
T04659
Symbol
iars
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104931396 (iars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
104931396 (iars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
104931396 (iars)
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
104931396 (iars)
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104931396 (iars)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104931396 (iars)
Prokaryotic type
Other AARSs
104931396 (iars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
DUF4238
Motif
Other DBs
NCBI-GeneID:
104931396
NCBI-ProteinID:
XP_010744697
LinkDB
All DBs
Position
VI:complement(13925874..13974172)
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPESINFPSQEEKIMQFWQEKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWETSVKRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVTVNFPLVENEEVALIAWTTTPWTLPSNLALCVNP
EFIYVKIKDNTTEKTYIMMEARLGALFKSESEYTLLDKFPGKTLKGKKYKPLFPYFSKCG
EKGAFQVVTDNYVKEEEGTGVVHQAPYFGADDYRVCTEFNIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKENGRLVNASSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLDNNGKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMTELEELTGVKVTDLHRESIDNLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPALIVQSYGADALRLYLINSPVVRAENLRFKEDGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDDNQFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDTSSIHYLMLPQVRESVIDKRIENAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALNDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAVTASIKELTSEQLEAFQKTGSITVDGHELHEEDLRLMYTFDQSSGSAAQ
YEAHSDAQVLVLLDISPDQSMLDEGVAREVINRIQKLRKKAHLVPSDEITVHYRCQPERD
YLDSVIQAHTDFILATTKAPLLPFPVPKTASVIIEEKTQLKGSDLELTIIKGSSAPRAPL
NGPACNYVNLRVKVNNKEQEGVVLLENPKGDNRLDLDKLKRVSSSIFGTNNTQLKFFNGG
SELTSKMDLQALSGKTLSVTSGSSSPGPAPSTDTLLCPYVNLLLCNAQPAECQTGELGTL
LLVNPVGQNGLDFSGLLSEAAKVFGLRSRRLKLYLDQDLTQELPADSSVKSLDTKTLFVR
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtccccgagtccatcaactttccctctcaggaggagaagatcatgcag
ttttggcaagaaaaggactgcttccaggaatgcctcaaacagtccaagaacaggcccaaa
tacaccttctatgatggccctccttttgccactggtcttccccactacggacacatccta
gctggcaccatcaaggatattgttactcgctttgcccatcagagcggcttccatgtggac
cggcgctttggctgggactgtcatggcctgcctgtggagtacgagattgataaaactttg
gggatcaaaggacctgaagatgtggccaagatgggcatcgctgaatacaacaagcagtgc
agaaacattgtcatgagatactccaacgagtgggagacttcagtgaagcgaatgggaaga
tggatcgacttcaagaatgactacaagactctctacccatggttcatggagactgtctgg
tgggtgttcaaacagctgtacgacaagggtctggtttaccgaggcgttaaagtcatgcct
ttctccactgcatgcaacactcctctgtccaactttgagtcccaccagaactacaaggac
gttcaggacccatctgtgaccgtcaacttcccattggttgagaatgaggaagtggctttg
attgcctggacgaccacaccctggacactgccgagcaacctggctctctgtgttaacccg
gagttcatatatgtcaagatcaaagacaacaccacagaaaagacctacatcatgatggag
gccagactgggagctctgtttaagtctgagagcgagtacaccctcctggacaaatttcct
ggcaagacgctgaaagggaaaaaatacaagcctcttttcccgtactttagcaagtgtggg
gagaaaggagcattccaggtggtgacggataactacgtcaaggaggaagagggtacagga
gtggtccaccaggcaccctactttggagctgatgattacagggtgtgtactgaattcaac
atcatccagagggaccaagctcctatctgccccgtggatgcctcgggctgctttacatca
gaggtcactgactttgcgggacagtatgtcaaagatgctgacaagaatatcatcaagtgg
ctgaaggagaacggtcgcctcgtcaatgccagcagtttcaaacatagttacccattctgc
tggaggtccgacacacccctgatctacaaagccgtccccagctggtttgttcgggtggag
cacatggtggataaactgttggacaacaatgggaaatgctactgggttccagagtttgtg
cgggagaagcgtttcggaaactggctgagagacgcacgagactgggcgatttcgaggaac
cgttactggggcacgcctatccctctctgggtcagcgacgactttgaggaggtggtgtgt
atcgggtccatgactgaactcgaggaactgaccggagtcaaagtaactgatctgcatcgg
gagagcatcgacaatctgaccatcccgtcacggtgcggtaagggcgtgctgcggagggtc
acggaggtgtttgattgctggtttgagagcggcagcatgccttacgcccaggtccactac
ccttttgaaaacaggaaggagtttgaggacactttcccagcagacttcattgccgaaggc
attgaccagacaagaggatggttctacaccctgttggtgctctccacagcactgtttggc
aaaccgcccttcaagaatgtcattgttaacggactggtactcgcaagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccagcactgatagtgcagagctacggagcc
gatgccctcagactgtacctcatcaactctcctgtagtgagagcagagaacctgcgtttc
aaagaggatggagtgcgagacgtgctgaaggatgtcttcctgccgtggtataatgcctat
cgcttcctggtgcagaacgtacaaaggttacaaaaggaggatgataaccagttcctgtac
aatgaaaacacagcgaagcagagtgacaacatcatggacaaatggattcagtcctttaca
cagtccctcatccagttcttcaaggctgagatggacgcttaccgtctttacaccgtcgtg
cctcggctggtcaagtttgtcgatatgctcactaactggtacgtcaggacaaacagacgc
cgtctgaagggagagagtggcacagaggactgcctgtgggcgctggaaaccctcttcagc
gttctgttctccatgtgcaggctaatggctcccttcacacccttcattacagaaatgatg
taccaaaatctgcgtcacctcattgaccctgcttcggttgaagagaaggacaccagcagc
atccactatctcatgctgccccaagtcagggagagtgtgattgacaagcgcattgagaat
gccgtctcccagatgcagtctgtgattgagctgggcagagtgatccgagacaggaagacc
ctgcctgtcaagtacccattgaaggaggtggtagttatacaccaggacccagaggctctg
aacgacatccagtctctgcagaaatacatcctggaagagcttaatgtgcgacagttgacg
ctgtcaacagacaaggacaagtacggtatccgtctgagagccgagccagaccacatggtg
ctgggcaagagactaaagggagccttcaaagctgtcactgcttctatcaaggagctcacc
agcgaacagctcgaggccttccagaagacaggatccatcacggtggacggccatgagctt
catgaggaggacctgaggctgatgtacacctttgaccagagctctggctcagccgcacag
tatgaagcacactctgatgcacaggtcctggtgctgctggatatctccccggaccagtcc
atgctggatgaaggcgttgcccgagaggtcatcaaccgcattcagaaactacgcaagaag
gcccatttggtgccatcagatgagataactgtgcactaccgctgccagccagagcgcgat
tacttggattctgtgatccaggctcacaccgacttcatcctggctacgaccaaggctcca
ctgttgcctttccctgttccaaagactgccagtgtcatcatagaagaaaagactcagctg
aagggctcagacttggagctaaccataataaagggatcttcagctccacgggcccctcta
aatggaccagcttgcaactatgtgaacctcagggtgaaagtcaacaacaaagaacaagag
ggggtggtgctgttggagaaccccaaaggggataacagactagacttggacaagctgaag
agagtgagcagcagcatctttggaaccaacaacacccagctcaaattcttcaatggcggc
tctgagctgaccagcaaaatggacctgcaggctctgagcggtaaaaccttgtcagtgacg
tcaggctcttcctcccctggccctgccccctccaccgacaccctcctgtgtccttacgtg
aacctgctgctctgcaatgcacaaccagctgagtgccagacaggagagctgggcaccctc
ctgctggtgaacccagtgggccagaatgggctcgatttctcaggcctgctctctgaggct
gcaaaagtcttcggcctccgcagcagacggctcaagctctacctggaccaggacctcacc
caggagctgccagctgattcatcagtaaagtctctagacaccaaaactctctttgtgaga
gttctcccaacaactgccgaagcataa
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