Larimichthys crocea (large yellow croaker): 104931528
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Entry
104931528 CDS
T04659
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04217
Necroptosis
lco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104931528
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104931528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104931528
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
104931528
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
CATSPERB_Ig-like
Motif
Other DBs
NCBI-GeneID:
104931528
NCBI-ProteinID:
XP_010744852
UniProt:
A0A6G0IHW6
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Position
II:complement(12104289..12111757)
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AA seq
442 aa
AA seq
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MALSSGGWAPPAPVPASSSQQAACGSGSSSSGPPLTACCSTVLMSVRVSVCHSGIRPLCL
PGAGSEALRLQLSMDPSRAGEFRLALRDTSGNRSVFIADFDLRSVQYEVKSPRCHEMRLA
APPHDCIRFNFRCDREAEEWATVVMSSLREAHRVANINTCESDGRLNHTAAAMEQWSSAS
LPLTEELCLELARAIEAGDTQAASQHASALARQKAALTIQLSEKNYADGEISLSVVVEDV
SSSCCVTVKVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKDGDT
AYLYLISARQARITRQLFQQDLESALLAPPLPPGNGPTSQDWRGYSTLPSRLPHNNQGST
GGGSDRPGDIKDVLDIEHLQLNDHANKGSKTQTEWACPSCTFINKPSRPGCEICATARPD
THIQQERGRREDRGESGLSSSS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagctcgggcggctgggctcctccagccccggttcctgcttcttcgtcccag
caggctgcatgcggcagcggcagcagcagcagcggccctccgctgacggcttgctgcagc
accgtgttaatgtcagtccgggtttcggtgtgtcattccgggatccgtccgctgtgtctc
cccggagcgggcagcgaggctctgcgcctacagctcagcatggacccgagccgggccgga
gagttccgactggctctgcgtgacacgagcggaaaccgcagtgtgttcatcgcagacttt
gacctgcgctcggtgcaatacgaggtcaaatcccctcgctgccatgagatgcgtctcgct
gctccgccccacgactgcatccgcttcaacttccgctgcgaccgcgaggccgaggagtgg
gccacggtggtgatgtcatcactaagggaggcacatagagttgcaaatattaacacatgt
gaatcagatggcagactcaaccacacagcagcagctatggagcagtggagctcggcctcg
ctgccgctcactgaggagctttgcttggagctcgccagggcgattgaagccggtgacaca
caggccgcctcgcagcatgcatccgctctggccaggcaaaaagcagcactgacgattcag
ctgtctgaaaagaactacgcagacggagagatcagtttatccgtggtagtggaggatgtt
tcgtcatcctgctgtgtcacggtcaaagtctttccatacatgactgtggctgcactcaag
caacaggtttttcttgagtacggtttccatcctcgcgtgcagcgctgggtgatcggtcag
tgcttgtgcaccgagccgaggtcactggcctcctacggggtgcagaaggacggcgataca
gcgtacctgtacctgatctctgcacggcaagcccgcatcacccgccagctgttccaacag
gacctggagagcgccctcctcgccccacctctcccaccgggaaacggacccacatcccaa
gactggaggggttacagcaccttgccttcgaggcttccccacaacaaccaggggagcaca
ggcggaggaagcgacagaccgggtgacatcaaagatgtcctcgacattgagcatctgcag
ctcaacgatcacgccaacaaaggcagcaaaacacagacggagtgggcttgtccctcatgc
actttcatcaacaagccgtcccgtccgggctgtgaaatctgcgccacagccagacctgac
acacacatccagcaggagagagggaggagagaggatcgaggagagtctggtttaagcagc
agcagctga
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