Larimichthys crocea (large yellow croaker): 104931935
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Entry
104931935 CDS
T04659
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104931935
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
104931935
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
Atx10homo_assoc
Nipped-B_C
Arm_2
CTX_RstB
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
104931935
NCBI-ProteinID:
XP_010745366
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Position
XV:15126680..15141828
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AA seq
725 aa
AA seq
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MMAPEPLRSAMTSLGSDDTSLAVPSDNKLRSGQQRVLDQVHTIKRSKSKHGVKNGTLSPS
PTSMSPTASYEFGMFKFSPSKANGTLGRISTTLTGYSKGLNTQKSRTLSTKSMGGRNFST
SGAWEQQVNTATWPKGPNGLKPSRSDPVLAPPLVPAPTSGTIMKSKGMTIQNQKTFQSRV
NKQSSYSMTNTSQMTNTSQMTNSQTRIIRPPSSQSQVDGKTGTSKGSKIEQKSGVNSGVS
ISDLTVREAVEYLSHPEENFQQCGATFIQHITFKEERTKEEVYQLGGIPTLVALLESSNP
GVSQGAAGALRNLVFKHHDNKMEVQHCSGISKALRLLKETDSTETQKQITGLLWNLSSAD
VLKEELIATALPALTENVVVPFNCWSDSSANNNIHPDVFYNATGCLRNMSCGKKKERQQM
RECRGLIDSLMSYVQSSVAEENPDDKSVENCTCILHNLTYELENECPECFSKFQPMTSGT
PKSPVIGCFSPRSHKAQNEFSYDVDQCQVPDESTPTGVKWLCHPKAMQTYLSLLGSSQKD
ATLEASCGALQNLTAGKGLGSHAMSQILTQKLGALVHISPLLKSPNQNLQKTAMSLLDNM
SRASSLHSTMAKEMLPELAGLLSAGPREMGNSDETIAAACNIMRTLMLSNSETSKKVLNN
EIVSSLADLSENASFPKGSKAASLLLYSLWNDNNLQSAAKKLGMSKSLFVNANTTAVHRL
AQVIE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggaaccgctgcgatccgcgatgacgagcctgggatcggacgacacgtcg
ctcgctgtcccctccgacaacaagctgcgctcgggacagcaacgcgtgctggatcaggtg
cacaccatcaagagaagcaagtccaaacacggggtgaaaaacggcacgctgtctccttca
ccaacaagcatgtctcccacggcatcatatgagtttggaatgttcaagttttctccgtcc
aaggcaaacggcacgttgggccgcatcagcaccactttaacaggctacagcaaagggctg
aatactcagaagagtcgcactctatccactaaatccatgggaggacgaaatttcagcacc
tcaggcgcatgggaacagcaagtcaacactgccacctggccaaagggtcccaatgggctg
aaacccagtcgcagtgaccctgtattggctcctccgcttgttcctgctcctacaagtgga
actattatgaaaagcaaaggcatgactatccaaaaccagaagaccttccagagtcgagta
aataaacaaagctcctattccatgaccaacacctctcagatgaccaacacctctcagatg
accaacagccagacacgcatcatccggccgccctcttcccagtctcaggttgacggcaag
acgggtacctccaaaggatccaaaatagagcagaaatcaggggtgaacagtggggtgtcc
atctcagacctgaccgtaagggaggctgtagagtatctgtctcaccctgaggagaatttc
cagcagtgtggagccacattcatccaacacatcactttcaaagaggagcgcaccaaagag
gaggtttaccaactaggtggtatccccactctggtggccctgctggagagctccaaccct
ggggtgagccagggtgctgctggggctctgaggaacctggtgttcaagcaccatgacaac
aagatggaggttcagcactgtagtggtatatctaaggccctgaggctactaaaggagaca
gattctactgagacccagaagcaaatcactggcctgctatggaacctgtcctctgctgat
gtgctgaaggaagagcttatagctacagcactgccagccctgactgagaatgtggtggtg
ccattcaactgctggtccgacagcagtgccaacaacaacatacaccctgatgtcttctac
aatgccacagggtgcctgcggaacatgagctgcggcaaaaagaaggagaggcagcaaatg
agagagtgtcgcggcctgatcgactccctcatgagttacgttcagtccagcgtggcagag
gaaaaccccgatgacaagtctgtggagaactgcacatgcatcctccataacttgacctac
gaactggagaatgagtgtcctgagtgcttcagcaagtttcagcccatgacctcagggacc
ccaaaaagccctgtgattggatgcttcagccccaggagccacaaggctcaaaatgagttt
tcatatgatgtggatcagtgccaagtgccagatgagagtaccccaacaggtgtgaagtgg
ttgtgccaccccaaagctatgcagacctacctgtctctgctgggctcatctcagaaagat
gccaccctggaagcctcctgtggtgccctgcagaacctcactgccggcaagggactgggg
tcccatgccatgagccagattctgactcaaaagctaggggctctggtgcacatttcccct
cttttaaagtctccgaaccagaacctgcagaagactgccatgtccctgctggataacatg
tctcgggccagcagtttgcactccaccatggcaaaagagatgctgcctgagcttgctggc
ctcctcagcgctggcccccgggagatgggaaactctgacgagacgatagcagcggcttgc
aacataatgcggactctgatgctgtcgaactctgagaccagcaagaaggtcctcaacaat
gaaatagtgtcatcactggccgacctcagcgagaatgcgtctttccccaaaggcagcaaa
gcagcttccctgctgctgtacagcttatggaatgataacaatctgcaaagtgctgcgaaa
aagctggggatgagcaaatcactttttgtcaatgccaacaccactgcagtgcacaggctg
gcgcaagttatcgagtga
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