Larimichthys crocea (large yellow croaker): 104932075
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Entry
104932075 CDS
T04659
Symbol
actb
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
lco04145
Phagosome
lco04210
Apoptosis
lco04510
Focal adhesion
lco04520
Adherens junction
lco04530
Tight junction
lco04810
Regulation of actin cytoskeleton
lco04814
Motor proteins
lco04820
Cytoskeleton in muscle cells
lco05100
Bacterial invasion of epithelial cells
lco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104932075 (actb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104932075 (actb)
09143 Cell growth and death
04210 Apoptosis
104932075 (actb)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104932075 (actb)
04520 Adherens junction
104932075 (actb)
04530 Tight junction
104932075 (actb)
09142 Cell motility
04814 Motor proteins
104932075 (actb)
04820 Cytoskeleton in muscle cells
104932075 (actb)
04810 Regulation of actin cytoskeleton
104932075 (actb)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104932075 (actb)
05100 Bacterial invasion of epithelial cells
104932075 (actb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104932075 (actb)
03019 Messenger RNA biogenesis [BR:
lco03019
]
104932075 (actb)
03036 Chromosome and associated proteins [BR:
lco03036
]
104932075 (actb)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104932075 (actb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104932075 (actb)
04147 Exosome [BR:
lco04147
]
104932075 (actb)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104932075 (actb)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104932075 (actb)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
104932075 (actb)
NuA4 complex
104932075 (actb)
Chromatin remodeling factors
BAF complex
104932075 (actb)
PBAF complex
104932075 (actb)
GBAF(ncBAF) complex
104932075 (actb)
SWR1 complex
104932075 (actb)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
104932075 (actb)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
104932075 (actb)
Exosome [BR:
lco04147
]
Exosomal proteins
Proteins found in most exosomes
104932075 (actb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
104932075
NCBI-ProteinID:
XP_027140724
LinkDB
All DBs
Position
XII:2395546..2399981
Genome browser
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgccggagacgacgcccctcgtgctgtcttcccatccatcgtcggtcgccccagacat
cagggtgtgatggttggtatgggccagaaggacagctacgttggtgatgaagcccagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctcagagttgcccctgaggag
caccctgtcctgctcacagaggcccccctgaaccccaaagccaacagggagaagatgacc
cagatcatgttcgagaccttcaacacccctgccatgtacgttgccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtatcgtcatggactccggtgatggtgtgacc
cacacagtgcccatctacgagggttatgccctgccccatgccatcctgcgtctggacttg
gccggccgcgacctcacagactacctcatgaagatcctgacagagcgcggttactccttc
accaccacagccgagagggaaatcgtgcgtgacatcaaggagaagctgtgctacgtcgcc
ctggacttcgagcaggagatgggcactgctgcctcctcctcctccctggagaagagctat
gagctgcccgacggacaggtcatcaccatcggcaatgagaggttccgttgcccagaggcc
ctcttccagccatccttcctcggtatggaatcttgcggaatccacgagaccacctacaac
agcatcatgaagtgcgacgtcgacatccgtaaggacctgtacgccaacaccgtgctgtct
ggaggtaccaccatgtaccccggcatcgccgacaggatgcagaaggagatcacagccctg
gccccatccaccatgaagatcaagatcattgccccacctgagcgtaaatactctgtctgg
atcggaggctccatcctggcctctctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggcccctccatcgtccaccgcaaatgcttctaa
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integrated database retrieval system
