KEGG   Larimichthys crocea (large yellow croaker): 104932083
Entry
104932083         CDS       T04659                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03420  Nucleotide excision repair
lco04110  Cell cycle
lco04114  Oocyte meiosis
lco04120  Ubiquitin mediated proteolysis
lco04141  Protein processing in endoplasmic reticulum
lco04310  Wnt signaling pathway
lco04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104932083 (rbx1)
   04120 Ubiquitin mediated proteolysis
    104932083 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104932083 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    104932083 (rbx1)
   04350 TGF-beta signaling pathway
    104932083 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104932083 (rbx1)
   04114 Oocyte meiosis
    104932083 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lco04121]
    104932083 (rbx1)
   03400 DNA repair and recombination proteins [BR:lco03400]
    104932083 (rbx1)
Enzymes [BR:lco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     104932083 (rbx1)
Ubiquitin system [BR:lco04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   104932083 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     104932083 (rbx1)
   Cul2 complex
     104932083 (rbx1)
   Cul3 complex
     104932083 (rbx1)
   Cul4 complex
     104932083 (rbx1)
   Cul7 complex
     104932083 (rbx1)
   Cul8 complex
     104932083 (rbx1)
   Cul9 complex
     104932083 (rbx1)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104932083 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104932083 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 104932083
NCBI-ProteinID: XP_019120618
LinkDB
Position
XII:complement(2612315..2614715)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccgagcggcacgaacagtggagccagcaagaag
cggtttgaagttaagaagtggaatgccgtggcgctgtgggcctgggacattgtggtggat
aactgtgctatctgtcggaaccacatcatggatctctgtatagagtgtcaggccaaccaa
gcctctgcaacctctgaggaatgcactgtagcctggggcgtctgcaatcatgcttttcat
ttccactgtatctctcgctggctgaaaaccagacaagtttgccctctggacaacagagag
tgggaatttcagaaatacggacactag

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