Larimichthys crocea (large yellow croaker): 104932546
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Entry
104932546 CDS
T04659
Symbol
ptpn6
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 6
KO
K05697
tyrosine-protein phosphatase non-receptor type 6 [EC:
3.1.3.48
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04148
Efferocytosis
lco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104932546 (ptpn6)
09144 Cellular community - eukaryotes
04520 Adherens junction
104932546 (ptpn6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104932546 (ptpn6)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104932546 (ptpn6)
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
104932546 (ptpn6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
SH2_1
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
104932546
NCBI-ProteinID:
XP_010746103
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Position
XVI:4625998..4642929
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AA seq
581 aa
AA seq
DB search
MVRWFHRDITGLDAEEILKNRGVHGSFLARPSKKNVGDFSLSVRVGELVTHIRIQNTGDY
YDLYGGEKFATLSELVDYYTAENGTLQDRDGTVIELKYPLNCSDPTTERWFHGHLSGPNA
EKLLVARDEANTYLVRESLSKPGDFVLSVLTDERGKSGGKRVSHIKIMCQNDRYTVGGSE
KFDTLTDLVEYYKREGIEEISGNWVYLKQPYYSTRVNAADIDSRVQLLDKTQGQQDGEAE
NSKAGFWEEFDTLQKMEAKFKKSREEGQRPENKSKNRYKNILPFNDTRVILQEADPAVVG
SDYINANYVKNTLQETGDQKVYIATQGCLATTVNDFWQMVWQENTRVIVMTTREVEKGRN
KCVPYWPDLQSSKEVGRYVVTSKSEREAADYKVRVLEMCPVDKPNQSRAIWHYQYMSWPD
HGVPQEPGGVLSFLTQVNAKQREYPDAGPMIIHCSAGIGRTGTIVVIDMILETIDIIGLD
CDIDIPKYIQMVREQRSGMVQTEAQYKFIYLSVSQYIQTTKAKDCAYMETETEYGNLQLK
HQPANRKVSKNKEDVYENLSKGKKDVKKQKSDKKSSSVRKK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggttcggtggttccacagagacatcacaggcctggatgccgaggaaatactgaagaat
cgaggcgttcatggcagctttttagctcgacccagtaagaaaaacgtgggagatttctct
ctgtctgtcagggtgggcgagctggtcacccacattcggatccagaacacaggagactac
tatgacctgtatggtggggagaagtttgccactctgtcagagctggtggactactacaca
gcagaaaacggaaccctgcaggacagggatggcaccgtcatcgagctcaaataccccctc
aactgctccgaccccaccacagagaggtggttccatggtcatctgtctgggccgaatgca
gagaagctgcttgtggcacgagatgaggccaatacctacctggtcagagagtctctgtcc
aaacctggagactttgtcctgtcggttctaacggatgagaggggcaaatctggagggaag
agggtctcccacattaagataatgtgtcagaatgaccggtacacagtgggaggttcagag
aagtttgacacgctgacagacttggtggagtactacaaacgcgaaggcattgaggagatc
tctgggaactgggtgtatttgaaacagccatattactccaccagagtgaatgcagcggat
attgacagcagagtgcaactgctggataagacacaggggcagcaggatggagaggcagag
aacagcaaggccggcttctgggaagagtttgatactcttcaaaaaatggaggcaaagttc
aagaagagcagagaggagggccagaggcctgaaaataagagcaaaaacagatacaagaat
attcttcccttcaacgacaccagggtcatcctgcaggaggctgatcctgctgttgtgggt
tcagattacatcaatgccaactatgtgaaaaacaccctgcaggagactggagatcagaaa
gtttacatcgccactcaggggtgcttagcgacaaccgtcaacgatttctggcagatggta
tggcaggagaacacaagagtcatcgtcatgacaacaagagaagtcgagaaagggcggaat
aaatgtgtgccatactggcctgatctccagagctccaaggaggtgggtcgatacgtggtg
acctctaagtcagagagggaagctgctgattacaaagttcgagttttggagatgtgtcct
gtggacaagccaaaccagagtcgtgccatctggcactaccagtacatgagctggcctgac
catggcgtccctcaggagccaggtggtgtcctcagcttcctcactcaagtgaacgctaaa
cagagagaatatcctgatgctgggcccatgatcatccactgcagtgctggaattggtcga
acaggcacgattgtggtgattgacatgatcctcgagaccattgacattataggtctggac
tgtgatattgacatcccgaagtacatccagatggtgcgagagcagcgctctggtatggtg
cagacagaggcccagtacaagttcatctatctgtctgtgtctcagtacatacagaccacc
aaggccaaagactgtgcttacatggaaactgagacagaatatggaaatctgcaactcaaa
caccaaccagcgaacaggaaggtctcaaagaataaggaagacgtttacgagaatctgtca
aaaggaaagaaggatgtgaagaagcaaaagtcagacaagaaaagcagctcagtgaggaaa
aaataa
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