Larimichthys crocea (large yellow croaker): 104933306
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Entry
104933306 CDS
T04659
Name
(RefSeq) msx2-interacting protein isoform X1
KO
K25100
Msx2-interacting protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104933306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104933306
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104933306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
104933306
NCBI-ProteinID:
XP_010747021
LinkDB
All DBs
Position
VI:10298111..10315090
Genome browser
AA seq
3261 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDSSPSSSRDVTGFSRGTVGPVFGPPVSL
HTREGRYERRIDGSSESRERAYDHSPYGHHERSGTFDRQRHYNADYYRDRSMFAAAGPGS
SAIGGSFEASDPHFDSRIRDPFTLTNSTRRDLYRDDRGRRVDRTYHHRRSRSSHSSQSRH
PSPQRTTGQTPKTPHSPKRPPLSPGRGPRSRSRSRSSSSDSVSSTSSTGSGSDSNSSSSD
GSRARSVQSSATHAPAQSSMVLDSDEPRRSFGIKVQNLPVRSTDTSLKDGLFHEFKKHGK
VTSVQIHGASEDRYGLVFFRQQEDQEKALTVSKGKLFFGMLIEVTAWNGPETESENEFRP
LDGRIDEFHPKATRTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDIKKVNGVPQYAFVQYS
DIASVCKAIKKMDGEYLGSNRLKLGFGKSMPTTCVWLDGLATSITEQYLTRHFCRYGHVV
KVVFDRLKGMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYRSMQASGQ
DIRDFYEIPPERREERRPPYHEFTAERAYYENIRTPGLYPEDARRDYAARSRERFPELEH
YQGDHFDPRYHEDPRDYRDYRDPFEQDIRKYTYIQRERERERERFEADRSRWSPSHPRRP
VTPTVSPSPSERAPRDSERRVYSQSSERSGSVSSMSPPHFDKSEKTLLEHASKSDKSEKT
SQPDRVAGAEKTKRAKRKEKGDKDKAEKIKSRKAKGQSPSNPIPESELETGFDGASGRGR
GSDQDAHERQKSKGDSDSLTGNQLSSAHHDSVKSERSEMSKSENSDLDGKNRLKKHLKSD
PGNDGKDSSIDSDCHAAKKRRFADSGGRNIRQKRSRHEEEDGIQSADFGASASFLKESDT
EKHKDSQRRDSRLKPDKSGTQKEGQEDLRGQREKSEGSLDPLESKRHPGHTSSRRFSHEG
ITDQSSIRDQEHHASFKFGTQNADTDKSAKNKEDHVDIDLSQSYRKQMEQNRRLHQQQQQ
RESDKPDKPGSPQESETEDLEHRSLVHEVGKPPEDVTDNFPSHKLKKLDQFDTDSGIKKE
RVYRSFRQKSEDPDWNSSASPGHQHFSHHADVDFVDPSQKELSRNEEKIHPDLELLVKRT
HNTQVNKPNTPLLSVEEEQQKRWESRVKQDLLPDLNFSRSLSKNIHNRKRLEYGIWHDLE
PGEVRSDPEEERDPKPHSPVPSTSMPFSERPRVDRFSDPKLAHLERNKFCSYALDQTITP
DTKALLERAKSLSSSREDNWSFLDYDSQFASLRNRKDTEKVESAPRPTPSWYMKKKKIRI
GSEDKLDDRKEEPKPEEQERRELFASRFLHSPVFELDSRRLQHLERKHEEPEHTQNQQSG
QQGTVDGELDSGPVVLFQSRFLELTRQQQQKNKTQQLQEVKGDAMLVDENKVEKSPAQEQ
QALQTTESVTEPEIKPISPAEDPISEPRLTPTAVAQSVVKNLPPPEEKCVALNPAPDPYS
TVSFIKEEVKEEAKENEPVVPVHHPPTEASSDSETATLAAAEQSYLVDGCKLSPSEGKLD
IDMEDVKPPSSEKPRLRDSQEFVSSSEAELDPETTQQEVPDATSPMPPSLTEEVDIVKKE
TYSTSKAVAEPEEVKKLQISKVSIDNDTSNEPTSPQKEHKTKEIKNKKCKQSPAQVAPVP
VLSTSGSEKQATRKSERIDKEKLKRGSSPRAEARSTGKSPIHGSDPDMLEQSISLGRARR
RNVKSVYATVVEDDVPVRYGKETTESPRSARKRATDKDATQQNTEQDPPAPTPPNKRGRP
PKNRKQGEESLAVKVEKSKMDNKDTDSNESESGERIPRVSKGKTSPHSAKSSLNQMSTVP
GSGSTRKGEKTEVAEDDDQEMDFTDEDSLALQDTSSSCKEDLLIKVDQKKEDKGKQGREL
DRDKDVFHEKACEGKSNGQETDSSVSEEKPTSEKDRIGRGKTKLTRTPKSPVLKNLKIRL
NVAEVKDLLQLGDDELGNQEDSSKKLGPGEHSDHVSKSTNANRGGSVNEEKENAASEKKD
LLETPKNLISQELELEQAVENIAKLTDPAFPTEPPTPPVPPAEVKSDPEEEKPSNPASET
ELMAAIDSITADPTVSLTQAPPPSADVGSEPEMQDFIQPAKEEEPETNTPALQEEPVFPT
TPKKGTNKGRPKRSKNQKQAKKDLKEGHSVSEESATTLTDATTSSVKIVPESTPSAATAA
VITPTTWKSEPEPSAVKTTDINAESESPPEEHTQHLKSVNPRSKSPICPKPQQAPSECIS
PSMSPLASRPSIRPIQPTHQSTIRIPVSPPDWRHQSKDTGVSSSPVMPLASKENQPLPSD
SENMDIDLGTSDLRQILMKHKNMPLPGSSSIPSNLLTLRDQNPTESNTPSAVVPNKSPLP
DGRMPTHQASSIVRSPASLPSPETKSVISVIASTATSVISRVCNPPEPEDKVNMNIANPC
VDMALPKPTYRPNKDDSGTYHGPSVGDEVGSAARFIVESPTLGTGSCPGLRVNTSEGVVV
LSHSGQKTEGRQRISAKISQIPQATAGDMESQQLVSMPQIKEMYGHSHSGLQKGPSSQTD
HGHPGKMQSTLSSIKQESTGLEKMESAYQSGPQGVVKRLAQGNQQVMSYHQEYMPMKHQK
KIENDSHSTDGAKPPWTSAISPAISPHLPSPPGNHVGFVTAAADRAPSHISGVKQEPRSP
RKSGHPHSPFTKVSSPIGSSSPKGIPVMLSTGIPAMQQFIPGVHHPEQSVIMPPHSVPGG
LGRMSPHRVTQSIPVGHLVQDVRVNTPPLSVMSYGMHSESHSSPWSGPMQPRPTSPQAVG
RDKVLKVNPSLRGHEGEQEEPRRFQQAPGRQSATQLKPETIQSDPRGPLRGSVQLETYMA
QRDMRVLLHQQGERLATDPHSGHIQETPPSSAPSSLPMSLSPRAHVLPKGVSEKDITKPL
EAKRPHSPISKDGMMGIRQSVQAMASPQRVQLITPGPSGSFSEYSGMYSNPRSIHSQIPE
TSPVGLNQPPLSVTPTMGADLQAKPDGKMTQPVNMVQLLTKYPIVWQGLLALKNDTAAVQ
LHFVCGNKALAHRSLPLQEGGALLRIVQRMRLEASQLESVARRMTGDSDFCLLLALPCGR
DQDDVLNQTQALKAAFINYLQTKLAAGIINIPNPGSNQPAYVLQIFPPCEFSESHLSQLA
PDLLNRISSISPHLMIVITSV
NT seq
9786 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacacgtccgagaggag
aagatcgtggagcattttaaacggtatgggcgagtggaaagtgttaaagtgctgcggaag
cgagggtcagagggtggtgttgcagcctttgtggattttgtggatatcaaaagtgcgcag
aaggctcacaatgctgtcaacaagatgggagacagggaccttcggactgactacaatgaa
cccgggtcagtgcctagtgctgttcggggccttgaagacagctccccctcgagcagtcga
gacgttacaggattctctaggggaacagttggtccagtgtttggtccacctgtgtccctt
cacaccagagagggacgttatgaacggagaatagatggtagctcagaaagccgtgaacgt
gcatatgatcacagcccatatggacaccatgaacgcagtggcactttcgacagacagcgt
cactacaacgctgattattacagagatcgttctatgtttgctgccgctggcccagggagc
agtgctattgggggaagctttgaggcgtcagacccacattttgactctagaattcgagac
cccttcactcttactaattctacaagacgtgacctatacagagatgaccgagggcgacgt
gttgatagaacctaccatcaccgtcggagccgatcatctcattcctcacagtcgaggcac
ccttccccacaacggaccacaggacaaacccccaaaactcctcattccccgaaaagacct
cctctgtcccctgggagaggcccacgatctcgatcccggagcagatcttcaagctctgat
tctgtcagcagcaccagcagcacgggcagcggcagcgattcaaacagcagctcaagtgat
ggttctcgggcgcgctctgttcagtcgtcagctacacatgcaccagctcagtcttctatg
gtgcttgactctgatgagccacgcagaagctttgggataaaagtacaaaacctaccagtg
cgctccacagacacaagtttaaaagatggacttttccatgaattcaagaaacatgggaaa
gtgacctcagtgcagatacatggagcatcagaagaccgctatggtttggtgttctttaga
cagcaggaggatcaggagaaagcccttactgtctccaaaggaaaactgttctttggcatg
cttattgaagtcactgcctggaatggtcccgaaacagagagtgaaaatgaattcaggccc
ttggatggacgaatagatgagttccacccaaaggccacaaggacactgtttataggcaac
cttgagaagaccaccagttaccaacagctccttgacatttttcaacgctttggagaaatt
gtggacattgacatcaagaaagtaaatggagttccccagtatgcctttgtgcaatattct
gatattgcaagtgtctgtaaagccattaagaagatggatggagagtatctggggagcaac
agactaaagcttgggtttgggaaaagtatgcccacaacatgtgtttggctagatggtctg
gcaaccagtattacagagcaatacctcactcggcatttctgccgctatggacatgtagtt
aaggttgtttttgatagattgaaagggatggccctcatcttgtacaacaacacagatttt
gctcaggcagctgtaagggagaccaaaggttggaagattggtggcaataaaataaaggtg
gattttgcaagtcaagagagtcagatggcattctaccgatctatgcaggcatctggtcaa
gacattagagacttctatgaaattcctcctgaacgacgagaggaacgcagacctccatac
catgaatttacagcagaaagggcttactacgagaatatacgaacccctggtctctatcca
gaggatgctcgaagagactacgctgctcgcagcagagagcgttttcctgaactggaacac
tatcagggggatcactttgacccacgttatcatgaagacccaagagactacagggactat
agagacccctttgagcaagacatccgaaaatacacatatattcaaagggagagagaaaga
gagcgggagcggtttgaggctgaccgcagcaggtggagcccttcacatccaaggcgacct
gttactcctacagtatcgccttcaccatctgagcgtgctcccagagattcagaacgacgg
gtttacagccagtcctctgagcgaagtggtagtgtaagctcaatgtcaccaccacacttt
gacaaatctgaaaagaccctgcttgaacatgcctcgaagagtgacaagagtgaaaagacc
agtcaaccggatcgtgttgcaggtgctgagaaaaccaaacgtgcaaaacgaaaagagaaa
ggtgacaaagacaaagctgagaagattaaatcaagaaaagcaaaggggcaatccccatcc
aacccaatacctgaatcagagcttgagactggttttgatggtgcgtccggaagaggaagg
ggatcagatcaagatgctcatgaaaggcagaaatctaagggggacagtgactctcttaca
ggaaatcaattgtcaagtgctcatcatgactccgtaaaaagtgaaaggtctgaaatgagt
aaaagtgagaattcagacttggatggaaaaaatcgactcaagaaacatctaaagtctgat
cctggaaatgatgggaaagattcctccatcgattcagattgccatgctgcgaaaaaaagg
cgctttgctgattccggtggaaggaatattcgtcagaagagaagcaggcatgaagaagag
gacggtattcaatccgctgattttggtgccagtgcctcgtttttgaaagagtcagatact
gaaaaacacaaagactcacaacgaagagattcaagacttaaacctgacaaaagtggcact
cagaaggagggtcaagaggaccttagaggacaaagagagaaatcagagggatctttagac
ccactggagtcaaaacgacatccagggcacacttcatccagaaggttttcacatgaggga
attacagaccaaagcagcatcagagatcaagaacaccatgcttctttcaaatttggtact
cagaatgctgacacagacaaaagtgctaagaacaaggaggaccatgttgacattgacctc
tctcaaagttaccgcaagcaaatggaacaaaatagacggttgcaccaacagcaacagcag
cgcgagtctgacaaaccagacaaacctggaagtccccaagaaagtgaaacagaggacttg
gaacatcgcagtcttgtgcatgaggttggtaaaccacctgaggatgtcacagataatttc
ccatctcacaaactaaagaaactagaccaatttgacactgactccgggattaagaaggag
cgtgtctacaggagcttcagacaaaaaagtgaagatcctgactggaatagcagtgcctct
ccgggacatcagcacttctctcaccatgcagatgtggactttgtggatccttctcagaaa
gagttaagtagaaatgaggaaaaaattcaccctgatctggagctattagtcaaaaggacg
cataacacacaggtaaacaagccaaacactcctttacttagtgtggaagaagagcaacaa
aagagatgggagagcagagttaaacaagacttgttacccgacctgaacttttctagaagt
cttagcaaaaacattcacaatcgcaagcgtttggaatatggtatttggcatgacttggag
cctggggaagtacgatctgatcctgaggaggaaagagatcccaaaccacactctcctgtg
ccctcaacatctatgcctttttcagagaggccaagagttgacaggttttcagaccccaaa
ctagcccatcttgaaaggaacaaattctgctcctatgcacttgaccagaccatcacacct
gatacaaaggctctgcttgaacgtgcaaaatctctctcatcttccagagaagataactgg
tcatttttagattatgattctcaatttgcaagtttgcgcaacagaaaggatactgagaag
gtagaatctgcaccaagacctacaccctcctggtacatgaaaaagaaaaagattcgcatt
ggatctgaagacaaacttgatgacaggaaggaggagcctaagccggaggaacaagaacgc
agggaactatttgcttcccgcttccttcacagccccgtctttgagctggattccagacga
cttcaacacttggaacgcaaacatgaagaacctgagcatacacaaaaccagcagtctggt
caacaaggcacagtggatggtgaacttgactcagggccagttgttcttttccagagtcgt
tttttggaacttacacgacaacaacaacagaagaataaaacccaacagctgcaagaggtg
aaaggagacgccatgctcgtggatgagaataaagtggaaaaatcacctgctcaagagcaa
caagctttgcaaacaacagaatctgtcacagaaccagaaattaaacccatcagtcctgct
gaagacccgatttctgaaccgcgacttacacctactgccgttgcacaatctgttgtcaaa
aatctgcctccaccagaagagaaatgtgttgccttaaatcctgcccctgatccatactcc
actgtgtctttcataaaggaagaggtaaaagaagaggcaaaagaaaatgaacctgttgtg
cccgtccaccacccaccaactgaggcgtcatctgattctgaaactgcaaccttagcagca
gcggaacagagttacttagtagatggatgtaaactttctccatctgaggggaaattggat
attgatatggaagatgtaaaaccaccctcttcagaaaaaccacgtctcagagattctcag
gagtttgttagcagttcagaagcagagctggatcctgagaccacacaacaagaagtgcct
gatgccactagtcccatgccaccaagtctgacagaagaagtcgatatagtcaagaaagag
acttattccactagcaaagcagtagcagagcctgaggaagtgaagaaacttcaaattagt
aaagtgtctattgataatgacacaagtaatgagccaacctcaccccagaaagagcataaa
acaaaagaaataaaaaataaaaagtgcaaacagtctcctgcacaagtagctccagttcct
gtcttgtctacctctggttctgagaaacaagcaacacgcaaaagtgaacgcattgacaaa
gagaagctgaaacgtggatcatcaccaagagctgaagcaaggtctacaggcaaatctcct
atccatggatcagatcctgatatgttggagcagagcatatcattaggcagagcaagacga
agaaatgttaaatctgtgtatgctaccgtggttgaagatgatgtgccagttcgttatgga
aaggaaacaacagagtcaccacgttcggcacgaaagcgagctacagacaaagatgcaaca
caacaaaatactgaacaggatccacctgctccaacccctccaaataaacggggccgtcct
cctaagaatcgcaaacaaggtgaggagagtttagcagttaaagtagaaaaatcaaaaatg
gacaataaagacacagattcaaatgaatcagaaagtggtgaacgaattccaagagtgtca
aaagggaaaacatcccctcatagcgcaaagagttcattgaatcaaatgtctacagtacca
ggatctggatcaacaaggaagggagagaaaactgaggtggctgaggatgatgaccaagaa
atggatttcacagatgaagactccttggctttgcaagatacatcaagttcatgtaaagaa
gatctgttaataaaagttgaccaaaagaaagaggataaaggcaaacaaggaagagaactg
gacagagataaagatgtattccatgaaaaagcttgtgagggcaaatcaaatgggcaagag
acagattcctcagtgtcggaagagaaacccacctcagaaaaagacaggattggtagagga
aaaaccaagttgaccagaactccaaagtctcctgtcctcaagaaccttaaaatcagacta
aatgtcgcagaggtgaaggatcttcttcagttaggggatgatgaacttggaaatcaagag
gattcttcaaaaaagttgggacctggtgagcacagtgatcatgtttcaaaatccactaat
gctaacagaggaggctctgtcaatgaagaaaaggaaaatgccgcttcggaaaaaaaggat
ctcttggaaacaccaaaaaacttaatttcacaggagctggaattggagcaggctgtggag
aatatcgctaaactcactgatccagcttttccaacagaaccaccgacgcctcctgtcccg
ccagcagaagtcaaaagtgacccagaggaggaaaaaccttccaatcctgctagtgagaca
gaactcatggctgctattgactcaataactgctgatccaactgtgtccttaacccaagcg
cctccaccaagtgctgatgtgggttcagaacctgagatgcaagacttcattcagcctgcc
aaggaagaggaacctgaaacaaatacacctgctctacaggaggagcctgtctttccaacc
acacctaaaaagggcaccaacaagggaagacctaagcgttcaaaaaaccaaaagcaagca
aaaaaagatttgaaggaaggacactcagtaagtgaggaatctgcaacaactttaacagat
gccacaacttccagtgtaaagattgttcctgaatcaactccatcagcagcaactgctgca
gttattactcctactacttggaagtcagaacctgagccttcagctgtcaagactacagat
ataaatgcagagtcagagtcacctcctgaagaacacactcaacatctgaaatctgtcaac
cccagatctaaaagtccaatatgcccaaagcctcaacaggcaccatctgaatgcatctct
ccttccatgtctccactagctagcaggccaagtatcagacccattcaaccgacccatcaa
tcaacaattagaattcctgtttctccaccagattggcgccaccagtctaaagatacagga
gtctcctcttcacctgtcatgccgttggcatctaaggaaaaccagcctttaccctcagac
tctgaaaacatggatattgatcttggcacaagtgacttgagacagattctaatgaaacac
aaaaacatgccactgccaggcagtagctctatccctagtaatctgctcaccctacgagat
cagaaccccactgaaagtaataccccatcagctgttgtgccaaataagtcaccactacct
gatggtagaatgcccactcatcaagcatcatctattgttcgatctccagcctcactacca
tctcctgagacaaagtctgtgatctctgttattgcatccactgcaacctctgttatcagt
cgtgtttgcaaccctcctgagcctgaagacaaagtaaacatgaacattgcaaatccttgt
gtggacatggctctgccaaaaccaacctataggcccaacaaagatgatagtggaacatac
catgggccgtctgttggtgatgaggtgggaagtgctgcacgctttattgttgagagcccc
acacttggcacaggatcttgcccaggtctgagagtaaatacatctgaaggagtggtagta
ttgagccactcgggccagaaaactgagggacgacagaggatcagtgcaaaaataagtcaa
atcccacaagcaacagcaggtgacatggaatctcagcagttggtgtccatgccccagata
aaggaaatgtatggccattctcattcaggacttcaaaaggggccttcatcacagacagat
catggacatcctggtaaaatgcaatcaactttgtcttctattaaacaagaaagcactggt
ttggaaaagatggaatctgcttaccaatctggacctcaaggagtagtgaagcgtcttgca
cagggtaaccagcaagtaatgagttatcatcaagagtacatgccaatgaaacatcaaaag
aaaatagaaaatgattctcacagtacagatggagctaaaccaccttggacgtcagctata
agtcctgctataagcccccatttgccctctccacctggcaaccatgtaggatttgttaca
gcggctgctgacagagctccctcacacatcagtggggttaaacaggaaccacgttcccct
cgcaagtcaggtcatccacactctccatttactaaagtgtcatcccccatcggctcctca
tcacccaagggcataccagtgatgttgtccactggcattcctgccatgcaacagtttatt
cctggtgtacaccatccagaacagtcggttatcatgccacctcacagtgtgcctggaggc
ttgggacggatgtctcctcaccgtgttacccaatcaattccagtgggtcatcttgtccaa
gatgttcgggtcaatactccccctctctctgtgatgagctatgggatgcatagtgagtct
cattcctctccctggtctggtcccatgcaaccacgacccacatcacctcaggctgttggc
agagacaaggttctcaaggtaaaccccagtttaaggggtcatgagggggaacaggaagaa
cccagacgcttccagcaagctccaggaagacaatctgccacccagctaaaaccggagact
atacagtcagatccccgtgggccgttgcggggtagtgtccagttagaaacgtacatggca
caaagagatatgcgtgtgctcttgcatcaacagggagagcgtttggccacagaccctcat
tctggacacattcaagagactcccccctcttcagcaccttccagcctacccatgtccttg
tctccaagagcacatgttttgcctaaaggtgtgtccgagaaggatataacaaagccgctg
gaagcaaagaggccacactctcctatttctaaagatggaatgatggggatccgacaatct
gtgcaagcaatggcctctccgcagagagttcagctaataacaccaggaccaagtggctca
ttctcagagtattcaggcatgtactcaaacccaaggagtatccattctcaaataccagag
acatcgcctgttggacttaaccagccaccgctgagtgtcacaccaaccatgggtgcggac
ctccaggcaaaaccagatggcaagatgacgcaacctgttaatatggtgcagttgcttacg
aaataccctattgtgtggcaaggcctgctggcactgaagaatgacacagctgcagtccag
ttgcattttgtctgtggtaacaaagctttggctcatcgatcgctgcctctacaagaagga
ggcgcattgcttaggattgtccagagaatgagactagaggcatcacaactggagagtgta
gcccgaagaatgacgggggacagtgacttctgtcttctccttgctctgccatgtggacga
gatcaagatgatgtcctgaaccaaactcaagcgcttaaggccgctttcattaactacttg
cagacaaagttggctgctggtatcatcaatattcctaacccaggctccaatcagcctgcc
tatgtgctacagattttcccgccgtgcgagttttcagagagccacttatcccagctcgcc
cccgaccttctcaacaggatctccagcatctcaccacacctcatgattgtcatcacctct
gtgtaa
DBGET
integrated database retrieval system
