KEGG   Larimichthys crocea (large yellow croaker): 104933337
Entry
104933337         CDS       T04659                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04010  MAPK signaling pathway
lco04060  Cytokine-cytokine receptor interaction
lco04150  mTOR signaling pathway
lco04210  Apoptosis
lco04217  Necroptosis
lco04350  TGF-beta signaling pathway
lco04620  Toll-like receptor signaling pathway
lco04621  NOD-like receptor signaling pathway
lco04622  RIG-I-like receptor signaling pathway
lco04625  C-type lectin receptor signaling pathway
lco04920  Adipocytokine signaling pathway
lco05132  Salmonella infection
lco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104933337
   04350 TGF-beta signaling pathway
    104933337
   04150 mTOR signaling pathway
    104933337
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    104933337
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    104933337
   04217 Necroptosis
    104933337
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    104933337
   04621 NOD-like receptor signaling pathway
    104933337
   04622 RIG-I-like receptor signaling pathway
    104933337
   04625 C-type lectin receptor signaling pathway
    104933337
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    104933337
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    104933337
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104933337
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:lco04052]
    104933337
   00536 Glycosaminoglycan binding proteins [BR:lco00536]
    104933337
Cytokines and neuropeptides [BR:lco04052]
 Cytokines
  Tumor necrosis fators
   104933337
Glycosaminoglycan binding proteins [BR:lco00536]
 Heparan sulfate / Heparin
  Cytokines
   104933337
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 104933337
NCBI-ProteinID: NP_001290314
UniProt: A0T1H7
LinkDB
Position
XIII:complement(32966701..32968515)
AA seq 252 aa
MVAYTTAPSDLEMGLEERTVVVVEKKSSTDWIWKVTGALLVVALCFGGVLVFAWYWTGKP
ELLTQSGQTEALIEKTTAEKTDPHYTLKRISSKAKAAIHLEGSYDDTQPTAQLEWKNGQG
QAFAQGGFRLVNNQIIIPQTGLYFVYSQASFRVSCNDGDEEGAGKRLTPLSHRIWRYSDS
IGSRASLMSAVRSACQNTAQEDNYGVGHGWYNAIYLGAVFQLNRGDKLWTETNQPTELET
DEGKTFFGVFAF
NT seq 759 nt   +upstreamnt  +downstreamnt
atggttgcgtacactactgcaccaagtgacttggagatgggtcttgaggagaggacggtg
gtggtggtggaaaagaagtcgtctacagattggatatggaaggtgacgggggcccttctt
gttgtggccctttgtttcggaggcgtcctggtgtttgcttggtactggactggaaagcct
gaactgctgacacaatcaggccaaacagaagcactaatcgagaagacgactgccgagaaa
acagatcctcactacacgctgaaacgcatcagcagcaaagccaaggcagccattcatttg
gaaggtagttacgatgacacccagccgacggcccagctggagtggaagaacggtcaaggc
caggcgttcgctcagggcggcttccgactggtgaacaaccagatcatcatcccacaaaca
ggcctctacttcgtctacagccaggcgtcgttcagagtctcctgcaacgacggcgacgag
gagggtgcggggaaacgcctcacacctctcagccacaggatctggcgctactcagactcc
ataggtagcagagcatctctgatgagcgccgtgaggtcggcgtgccagaacacagctcag
gaggacaactatggagtgggacacgggtggtacaacgccatttatctgggtgcagtgttt
cagctgaatagaggagacaaactgtggacggaaacgaaccagccgacagagctggagaca
gacgagggcaaaactttctttggtgtgtttgcattttaa

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