Larimichthys crocea (large yellow croaker): 104933696
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Entry
104933696 CDS
T04659
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain isoform X1
KO
K06752
MHC class II antigen
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04145
Phagosome
lco04514
Cell adhesion molecules
lco04672
Intestinal immune network for IgA production
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104933696
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104933696
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
104933696
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104933696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104933696
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104933696
Exosomal proteins of epithelial cells
104933696
Exosomal proteins of breast milk
104933696
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Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
MHC_II_beta
Ig_3
DUF3953
DUF202
Motif
Other DBs
NCBI-GeneID:
104933696
NCBI-ProteinID:
XP_019131040
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All DBs
Position
VI:21931273..21935242
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AA seq
295 aa
AA seq
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MKRSLCLLFLCLFSSTSVDCATNGSGYFMTADFRCAMYSRERTHVEYLVDWHFNEEFVMQ
YNSTVGKWTGFTPGGMITASLFNGDFYDVQQRKVEKQLICVDHVDMIFNVTEESIAEPSV
TLVESTSSSKNAMLVCSAYDFYPKNIRLTWLMNGQEVTSGVTFSDVLTNGDWTYQVHSYL
EYTPSIRQDRVSCMVEHASLREPKIYHRDLNQSDRRLLIGGVCFLVLGAVFLSLGLMQYR
RKRGNGANADVLKSVLPRVVEVGYPCNGTDDLLEHPGVIGPAWSEVCHVDPRLWW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctccctgtgcctgctctttctgtgccttttctcttcgacatctgtggactgt
gccaccaatggatccggatacttcatgacagccgacttcaggtgcgccatgtactccaga
gagcgcacgcatgtggagtatctggtggactggcatttcaacgaagagtttgtgatgcag
tacaacagcacggttggcaaatggacgggcttcactccgggcgggatgatcactgcatct
ctgttcaatggagacttctacgacgtgcagcagagaaaagtggagaagcagctgatatgt
gtcgaccatgtcgatatgatattcaacgtgaccgaggaaagcattgctgagcccagcgtc
actctcgtggagtccaccagctccagtaaaaacgccatgctcgtgtgcagcgcctacgac
ttttaccccaaaaacatcaggctgacgtggctcatgaacgggcaggaagtgacctcgggc
gtgacctttagcgacgtgttgacaaacggggattggacctatcaggtccactcttacctg
gagtacacaccttcaatccgacaggacagagtcagctgtatggtggagcacgccagcctc
agggaaccaaagatttatcacagagacttaaatcagtcagataggaggctcttgattggt
ggagtttgttttctggtgttgggagcggtgtttctgtccttgggactgatgcagtacagg
agaaaacgaggaaatggagccaatgcagacgtgctaaaatctgtacttcctcgagtggtt
gaagttggatatccgtgtaacggtacagatgacttattagagcacccaggcgtcattggg
cccgcctggtctgaggtctgccatgttgatccacgtctatggtggtga
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