Larimichthys crocea (large yellow croaker): 104936575
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Entry
104936575 CDS
T04659
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04620
Toll-like receptor signaling pathway
lco04621
NOD-like receptor signaling pathway
lco04622
RIG-I-like receptor signaling pathway
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104936575 (traf3)
04621 NOD-like receptor signaling pathway
104936575 (traf3)
04622 RIG-I-like receptor signaling pathway
104936575 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104936575 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
DUF4201
GAS
SPAM
zf-TRAF_2
ATG16
Sina_ZnF
DUF724
zf-C3HC4_4
MctB
Baculo_PEP_C
EzrA
FapA
Snapin_Pallidin
Fzo_mitofusin
FlaC_arch
Fez1
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
104936575
NCBI-ProteinID:
XP_027130745
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All DBs
Position
XXIV:complement(5556909..5574967)
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AA seq
595 aa
AA seq
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MSAGRSADGREVQIPLQQVAPSLATPLSVAPPITPPSHRPANPWPPSDFTASQGVPAGFQ
PLHGGFRDHFVETPEAKYCCEACRLVLCQPRQTECGHRFCQSCINEILSHPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSNHQHDCPKAQVSCQFHRYGCTFKSLNQDMRQHESTFAAEHLRMMANRSSTLEGKV
EDVKGELLERCKVLPALSSRLSELENQNDELREKNRQMEQKMATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVENLRGTLENVRTRLNALEQGGRSGTGSTTHTLASLETQLSRHDDMLS
VHDIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctggccacgcccctctcagtggctccacccatcacaccgccctctcaccgccca
gccaatccctggcctcccagcgacttcaccgcatcacaaggtgtgcctgcaggtttccag
cctcttcacggaggattcagagatcacttcgtagaaacgccagaggccaaatactgctgc
gaggcctgcaggctggtcctgtgtcagccacgacagaccgagtgtggacaccgcttctgt
cagagctgcatcaacgaaatcctcagtcatccaaacccggtatgtccagctgacatggag
cctctatttaaagacaagatcttcagagacgtttgctgccatcgggagatcatggcgctg
aaggtttactgtcgcagcgaagctaacggctgccaggagcagatgagcctgcagcagata
cctgaccacctgaacgtgtgtccgttctttgaggtgccgtgtccgttgggtaaatgcaaa
gagcgaatgatgaggaaggagatcccggaccacctgagctggaagtgcaaacacagagag
accagctgcgagttctgcatgaccaagatgcctctgaccgaccttcagaaacacaaagag
acggtgtgtccagcattcccggtctcgtgtccaaaccactgctccttctcctctctgccc
cggagtgagttgtccaatcatcagcacgactgtcccaaagctcaggtgagctgccagttc
caccgctacggctgcaccttcaagagtttaaatcaggacatgaggcagcatgagtccacc
tttgcagctgaacacctgagaatgatggcgaacagaagctccacattagagggcaaggtg
gaggatgttaaaggtgagctattagagaggtgtaaggtgcttcctgctctcagcagtcgt
ttgtccgaactggagaaccagaacgacgagctgagagagaagaaccgacagatggagcag
aaaatggccaccatgcagaaactcatgagctctcactcagagaagctcctggaggtggag
ctggagcttcgttctctccgtgtgctcagagacgaggtggagaacctgagagggacactg
gagaacgtccggacaagactgaatgctctggaacaagggggacgcagcgggactggatcc
acaacacacactctagcatccctggagactcagttgagtcgacatgatgacatgctgagt
gtccatgacatccgactggccgacatggacctgcgtttccaggtgctggagacggcaagc
tacaacgggactctgatctggaagattcgtgactacaagagacggaaacaggaagcagtg
gcggcaaagacactgtcgctgtactcgcagccattttacacgggttactttggatacaag
atgtgtgcccgcgtctacctgaatggggatggcatgggcaaggggacacatctgtcactg
ttcttcgtagtgatgaggggcgagtatgacgccctgctgccctggcccttcaaacagaag
gtgactctgatgctaatggaccagggtccgtcaaggaaacacttaggcgatgcctttaag
cctgatccaaacagcagcagcttcaggcgtcctgcagccgagatgaacatagcctccggc
tgtcctctctttgtgtcccaaagcgtcctggaaaccggcagctacatcaaagatgacacc
atcttcattaaggttaccgttgatacctctgaccttcctgacccgtga
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