Larimichthys crocea (large yellow croaker): 104937142
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Entry
104937142 CDS
T04659
Name
(RefSeq) exostosin-1b
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lco01100
Metabolic pathways
Module
lco_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104937142
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lco01003
]
104937142
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
104937142
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
104937142
Glycosyltransferases [BR:
lco01003
]
Glycan extension
O-Glycan
104937142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
104937142
NCBI-ProteinID:
XP_019125169
UniProt:
A0A6G0HS02
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Position
XIII:43664910..43782398
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AA seq
740 aa
AA seq
DB search
MQAKKRYLILLSAGACLVLLFYLGGVQLPAASRSRHDRSRNGYRSDQPWPHFSDPLHLFL
PWDQTDTEEYNLHISPRQKRDINTSVYKGKRCRMDSCFDFSLCHKNGFKVYVYPQQKGEK
ISESYQNILSTIEGSRFYTSDPGQACLFVLSLDTLDRDQLSPQYVHNLKTKVQNLPLWND
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRPNFDVSIPLFSKEHPRTGG
ERGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALHHVHNAEDVVLLTTCKHGKDWQK
HKDARCDKDNAEYDKYDYKEMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIIDWNTAAVIGDERLLLQIPTTVRSIHQDKILSLRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLEHGSRSSLMWNSHPGGLFALPQYSGYLGDFPFYYATLGIKPYPKFTAVIHA
VSPLVSQSQPILKLLVAVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHHLYTNYLPTSLKSMVDQLANCEDILMNFLVSAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGAMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctacctgatcctgctctccgccggtgcatgtctagtgcttctc
ttctacctcggaggagttcaacttccagcggcgagcaggagccggcatgaccgcagcaga
aatgggtaccggtccgaccagccctggcctcacttctcggacccgttacacctctttctg
ccgtgggatcagaccgataccgaggagtacaacctgcacatttctccgcggcagaagagg
gacatcaacacgagtgtttacaaaggcaagcggtgccgcatggactcctgctttgatttc
tccctgtgccacaagaacggattcaaagtttatgtttacccgcagcagaagggcgagaag
atctcagagagttaccagaatattttatccaccatcgaggggtccaggttttacacatca
gaccccggacaggcgtgtctgttcgtcctgagtttggacactctggaccgggaccagctg
tccccgcaatatgtccacaacctgaagaccaaggtccagaacctgcctctgtggaacgac
ggcaggaaccacctcatatttaacttgtactcggggacgtggccggactatacggaagac
ctgggctttgacatcggtcaggccatgttggccaaagccagcatcagcaccgagaacttc
aggcccaacttcgacgtgtccatccccctcttctccaaggagcacccgaggaccggcgga
gagagggggtacctcaagtacaactccatcccgccttttagaaagtacatgctggtgttc
aaagggaagcgctacctgacaggtatcggctcggacaccaggaatgccttacaccacgtc
cacaacgcggaggacgtggtgctgctcaccacctgcaagcacggcaaagactggcagaag
cacaaggacgcacgctgtgacaaggacaacgcggagtatgacaagtatgactacaaggag
atgcttcacaactccaccttctgtttggtgccccgcggcagacgactgggctcctttcgc
ttcctcgaggcgctgcaggctgcgtgtgtgccagtgatgctgagtaacggctgggagctg
cctttctccgagatcatcgactggaacacagccgcagtcatcggcgacgagaggctcctg
ctgcagatcccaaccaccgtgcgctccatccaccaggataagatcctgtcccttagacag
cagactcagttcctctgggaggcctacttctcctcggtggaaaagatagtgctgaccacg
ctggagatcatccaggaccgtgtgctggagcacggctccaggagcagcctgatgtggaac
agtcaccccggggggctcttcgccctgccgcagtactccggatacctgggagacttcccc
ttctactacgccacactgggtattaaaccgtaccctaagttcacagcagtcatccatgcc
gtctcccctctggtgtctcagtcacagcccatcctcaagctgctggtagctgtggccaag
tcccagtactgtgcacagatcattgtcctgtggaactgtgacaagccgctccccgccaag
caccgctggcctgccacctcagtgcccgtcatcgtcatcgagggggagaataaggtgatg
agcagtcgtttcctgccctacgagaccatcgtgactgatgcggtcctcagcctggatgaa
gacacagtgctgtccaccacagaggtggactttgccttcaccgtctggcagagttttcca
gagcgaatcgtaggttatcccgcccgcagccacttctgggacagcaacaaagagcgctgg
ggctacacttccaaatggaccaacgattattcgatggtgctgacgggggccgccatctac
caccggtattaccatcacctgtacaccaactacttacccacaagtctgaagagcatggtg
gaccagctggccaactgcgaggacatcctgatgaacttcctggtctctgctgtcaccaag
ctgccgcccatcaaggtcacacagaagaaacagtacaaggagaccatgatgggacagtct
tcgagggcttctcgctgggccgatccggaccactttgcccagcggcaaacctgcatgaac
aagttcgccagctggtttggcgccatgccactggtccactcccagatgagactggacccc
gtcctgtttaaggaccaggtctccattctccgcaagaaatacagggacatcgagaggctc
tga
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