Larimichthys crocea (large yellow croaker): 104937397
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Entry
104937397 CDS
T04659
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104937397 (dhx9)
03012 Translation factors [BR:
lco03012
]
104937397 (dhx9)
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104937397 (dhx9)
5.6.2.6 RNA 3'-5' helicase
104937397 (dhx9)
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104937397 (dhx9)
Translation factors [BR:
lco03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104937397 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Helicase_C
DEAD
Dicer_dimer
ResIII
nSTAND3
AAA_19
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
104937397
NCBI-ProteinID:
XP_027131708
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPNYDIRAAGNKNRQKFLCEVRVDGFNYTGMGNSTNKKDAQSN
AARDFVNYLVRIGEMKAAEVPALGVSAPDADQHDGGGGGGGGGGGGGGGFGSLPSSGPLP
PHLVVKAEKGEDSSGPVPGVTGLGYSGGAGGGSGWGGAGGEAQWDRGANLKEYYARRDEQ
EAQATLESEEVDLNANLHGNWTLENAKARLNQFFQKEKTSAEYKYSQVGPDHNRSFIAEM
QLFVRQLGRRITAREHGSNKKLAAQSCALSLVRQLYHLGVMEAYSGVTKKKEGETLEPFD
VNVSPDLQQQLAAVVQELGVHVPPPPEDPSSSVSLVQGKMAVFEPSQRQSGAGVVPWSPP
QVNWNPWTSSNIDEGPLAFCTPEQISGELHGELMYQLEHDDNLQKILMDREQLPVKQFED
EIMAAVDNNPVVIIRGATGCGKTTQVPQYILDRFVKGGKASDCNIVVTQPRRISAVSVAE
RVGYERGEDLGKSCGYSVRFESILPRPHASILFCTVGVLLRKLEAGIRGISHVIVDEIHE
RDINTDFLMVVLRDVVQAYPEVRVILMSATIDTTMFREYFFNCPIIEVFGRTFPVQEYFL
EDCIQMTNFVPPPMDRKKKDKDEDGGEDDTNCNVICGPEYTAETKRSMAQINEKETSFEL
VEALLRYIETLQVAGAVLVFLPGWNLIYSMQRHLETNPHFGSNRYRILPLHSQIPREEQR
RVFEPVPDDIRKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKT
NLEQRKGRAGRVRPGFCFHLCSHARFERLETHMTPEIFRTPLHEVALSIKLLRLGAIGHF
LSKAIEPPPLDAVIEAEHTLRELDALDTNDELTPLGRILARLPIEPRLGKMMIMGCIFHV
GDAMCTISAASCFPEPFVSEGKRLGFVHRNFAGSRFSDHVALLSVFQAWDDVRINGEDAE
TRFCEHKRLNMSTLRMTWEAKVQLKEILVNTGFPEECLMTQMFNTVGPDNSLDVVVSLLT
FGSYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSHDMTYPSPFFVFSEKIRTRAISA
KGMTLVSPLQLLLFACKKISSNGDIVELDDWIKLRIPHEVAGGVAALRAGLEALVVEVTK
DPEYIRQMDQTNERLLNLIRLVSKPSSAGLNMMASNQRMGDGPRPPKMGRFDGGGGYQGG
GGGYRGGGGGGGGYRGGGGYGGGGGYGGGGGYRGYRGGGGYRGGYGGGGGGYRGGGYGGG
GAYRGGGGGGGGGYGGGGAYRGGGGGGYRGGY
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcaagaacttcctgtacgcctggtgtggaaaaaagaagctgactccgaac
tacgacatccgagctgcggggaacaagaacaggcagaagttcctgtgtgaggtccgcgtc
gatggcttcaactacaccgggatgggcaactccaccaacaagaaggacgctcagagcaac
gccgccagggactttgtcaactacctggtccgaatcggtgaaatgaaagcggccgaggtc
ccggcgctgggggtgagcgctccagacgcagaccagcatgacggaggaggaggtggagga
ggtggaggaggaggaggaggaggaggttttggaagcctgccttccagcggtcctctgccg
cctcacctcgtggtcaaagctgagaaaggagaggacagcagcgggccggtaccaggagtg
actggactcggctactcaggaggagcaggaggaggctctgggtggggaggagcaggagga
gaagctcagtgggaccgaggagccaacctgaaggagtactacgcccggagagacgagcag
gaagctcaggcgacgctggagtccgaggaggtcgacctcaacgctaatctccacggtaac
tggacgctggagaacgccaaagcccgtctgaaccagttcttccagaaggagaaaaccagc
gctgagtataaatacagccaagtgggaccggaccacaacaggagcttcatagccgagatg
cagctgttcgtgaggcagctcggcagacggatcacggctcgtgagcacggctccaacaag
aagctcgcggctcagtcgtgcgctctgtctctggtccggcagctttaccacctgggagtg
atggaggcgtactcaggagtgaccaagaagaaggaaggagagaccttggagccgtttgac
gtcaacgtgtctccggacctgcagcagcagctggccgctgtcgtccaggagctcggagtc
cacgtccccccaccgcctgaagacccgagcagctcggtgtctctggttcaggggaagatg
gcggtgtttgagccgtcacagcggcagagcggagccggtgtcgtcccgtggtcgcctccg
caggtcaactggaacccgtggacgagcagcaacatcgacgagggaccgctggccttctgc
actccggagcagatcagcggcgagctgcacggcgagctgatgtaccagctggaacatgac
gacaacctgcagaagatcctgatggaccgtgagcagctgcccgtcaaacagtttgaggac
gagatcatggccgccgtcgacaacaaccccgtggtgatcatccgaggagcgacaggctgc
ggtaaaaccacccaggttcctcagtacatcctggaccgcttcgtcaaaggaggcaaggcg
tccgactgcaacatcgtcgtcacccagcccagaaggatcagcgccgtgtcggtggccgag
cgagtcggctacgagagaggagaggatcttgggaaaagctgcggctacagcgtccgcttc
gagtccatcctcccccgaccgcacgccagcatcctcttctgcaccgtcggcgttttgctg
cggaagctggaagcagggattcgaggcatcagtcacgttatcgtggacgagatccacgag
agagacatcaacacggacttcctgatggtggtcctcagagacgtggtccaggcctaccca
gaagtccgtgtcatcctcatgtcagccaccatcgacaccaccatgttcagagaatacttc
ttcaattgccccatcatcgaggtgttcggacgcaccttccccgtccaagagtatttcctg
gaggactgtatccagatgacgaactttgtgcctccaccgatggaccgtaagaagaaagac
aaagacgaggacggaggagaggacgatactaactgtaacgtgatctgcgggccggagtac
acggcagagacaaagcgttcgatggctcagatcaacgagaaggagacgtccttcgagctg
gtggaggctctgctcaggtacatcgagacgctgcaggtggctggagccgtgctcgtcttc
ctgccgggctggaacctcatctactccatgcagagacacctggagaccaacccgcacttt
ggaagtaaccggtaccggatcctgccgctgcactcgcagatcccccgtgaggagcagagg
agggtgtttgaaccggtgcctgatgacatcagaaaggtgattctgtccaccaacatcgcg
gagacgagcatcaccatcaacgacgtcgtctacgtcatcgactcctgcaagcagaaggtg
aagctcttcacctcccacaacaacatgaccaactacgccaccgtctgggcctccaagacc
aacctggagcagaggaagggccgagcgggcagagtccgacccggcttctgcttccacctc
tgcagccacgctcgctttgagaggctggagactcacatgactccagagatcttcaggacg
ccgctgcacgaagtcgctctgagcatcaaactgctccgacttggagccatcggacacttc
ctgtccaaggccatcgagccaccgccgctggacgccgtcatcgaggccgaacacactctg
agagagctggacgctctcgacaccaacgacgagctcacccctctgggtcggattctggcc
cggctgcccatcgagcctcgcctggggaagatgatgatcatgggctgcatcttccacgtc
ggagacgccatgtgcaccatctctgccgcctcgtgcttcccggagccgttcgtcagcgag
ggcaaacgtctcggcttcgtccacagaaactttgccggcagccgcttctcggaccacgtg
gctctgctgtctgtgttccaggcctgggacgacgtcaggattaacggcgaggacgctgag
actcgtttctgtgagcacaaacgtctgaacatgtcgacgctcaggatgacgtgggaggcc
aaagtccagctgaaggagatcctggtcaacacggggtttcctgaagagtgtctgatgact
cagatgttcaacacggtgggacctgacaacagcctggacgtggtggtgtctctgctgacc
ttcggctcgtacccgaatgtctgctaccacaaagagaagaggaagatcctgacgacggag
ggacgcaacgccctcatccacaagtcctcggttaactgcccgttcagcagccacgacatg
acctacccgtccccgttcttcgtcttcagcgagaagatccggaccagagcgatctcggct
aaagggatgactctggtcagtcctctgcagctgctgctgtttgcctgcaagaagatcagc
tccaacggggacatcgtggagctcgacgactggatcaaactgaggatccctcacgaggtg
gcgggcggcgtggcggctctgcgggccggactcgaggctctggtggtggaggtgaccaaa
gacccggaatacatccgacagatggaccagaccaacgagcggctcctgaacctcatcagg
ctcgtctccaaaccatcgtcagccggactcaacatgatggccagcaaccagaggatggga
gacggtcctcgacctccaaagatgggacgcttcgacggaggaggaggctaccagggaggt
ggaggaggctaccgaggaggaggaggaggcggaggaggatataggggaggaggaggatat
ggaggaggtggaggatatggaggaggtggaggctacagaggttacagaggtggaggagga
tacagaggaggatatggaggaggtggaggaggctacagaggaggaggatatggaggcggt
ggggcttacagaggaggtggaggtggaggaggaggaggatatggaggaggtggggcttac
agaggaggaggaggtggagggtacagaggaggttattaa
DBGET
integrated database retrieval system
