Larimichthys crocea (large yellow croaker): 104937575
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Entry
104937575 CDS
T04659
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X2
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104937575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104937575
Enzymes [BR:
lco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104937575
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104937575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
Motif
Other DBs
NCBI-GeneID:
104937575
NCBI-ProteinID:
XP_010752137
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All DBs
Position
XIV:12770916..12776373
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AA seq
394 aa
AA seq
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MYDRYQSSQQHPEAQYEMPYHNMGHYTDGPRDEPVMAELSVHREPTVYQEPFYQNCPPAP
NHYQEPVYQQNIREQQHHPAHLHHPQHQHAVQEQSVQHLPQPTAPPQVVTPVKKKRGRPP
KQQVEDGRIQEEDDEIEAAKKAKRALNRFNGMSVAEVMAKTLPDVITYNLDILIIGINPG
LLSAFKGHHYPNPGNHFWKCLFLSGLTEQQLNYMHDQSLPENYNIGFTNMVERTTPGSKD
LSSKEIREGGRQLLDKLQKYKPLIAAFNGKGIYEIFCKEIFGVKAKNLEFGLQPYKIPQT
ETVCYLMPSSSPRCAQFPRAQDKVHFYVKLKELRDQMKGLAPSHEVQETQYSFDLQLAKE
DAKRLAIKEEQVDPEYESCSGLPDNVRQNSNIPN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacaggtatcagtccagccagcagcaccccgaggcgcagtatgagatgccctat
cataacatgggacattacacagatggtcccagagatgagcctgtcatggcggagctatct
gtccaccgagagccgactgtttaccaggaacctttttatcagaactgtcccccagccccg
aaccactaccaggagcctgtctaccagcagaacataagggagcagcagcatcatcctgca
cacctgcaccaccctcagcatcaacatgcagtacaggagcagagtgttcagcacctacct
cagcctaccgcaccacctcaagttgtgacgccagtgaagaagaagcgaggccggcctcct
aagcagcaggttgaggacggcaggatacaggaggaggacgatgagattgaggccgccaaa
aaagccaagagggctctcaaccgcttcaacggcatgtcagtggctgaggttatggccaaa
acactgccggacgttatcacctacaatcttgatattttgataattggaattaatccagga
ctgttgtcggccttcaaaggccaccattacccaaacccaggaaaccatttctggaaatgt
ctgttcctttctggtctaactgagcagcagctcaactatatgcatgaccagagcctgccg
gagaattataacatcggcttcaccaacatggtggagaggaccacacctggcagcaaggac
ctctccagtaaggagatccgtgaaggaggtcgacagttacttgacaagctgcagaaatac
aagccattaatagcagcttttaatggaaaaggtatttatgaaatcttctgcaaagaaatc
ttcggtgtgaaggcaaagaatctggagtttggtcttcagccctacaaaatccctcaaact
gaaacggtgtgctacttgatgccatcgtcaagtccacgctgtgcccagtttccccgtgca
caggataaggtgcatttctacgtcaagctgaaggaactgcgagaccagatgaaaggcctg
gcaccaagccatgaggtgcaggagacacagtactcgttcgatctgcaactagctaaagag
gatgctaagaggcttgcaatcaaagaagagcaggtggatccagagtatgaaagctgtagc
gggctgcctgacaacgtgaggcaaaacagcaacatcccaaactaa
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