Larimichthys crocea (large yellow croaker): 104938308
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Entry
104938308 CDS
T04659
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04137
Mitophagy - animal
lco04140
Autophagy - animal
lco04217
Necroptosis
lco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104938308 (sqstm1)
04137 Mitophagy - animal
104938308 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
104938308 (sqstm1)
04218 Cellular senescence
104938308 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104938308 (sqstm1)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104938308 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104938308 (sqstm1)
Membrane trafficking [BR:
lco04131
]
Autophagy
Mitophagy
Cargo receptors
104938308 (sqstm1)
Pexophagy
104938308 (sqstm1)
Aggrephagy
104938308 (sqstm1)
Xenophagy
104938308 (sqstm1)
ER-phagy
ER-phagy recepters
104938308 (sqstm1)
Other autophagy associated proteins
Midbophagy
104938308 (sqstm1)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
104938308 (sqstm1)
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104938308 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
ASFV_360
Secretin_N_2
Motif
Other DBs
NCBI-GeneID:
104938308
NCBI-ProteinID:
XP_019120732
LinkDB
All DBs
Position
I:complement(9965637..9968584)
Genome browser
AA seq
432 aa
AA seq
DB search
MSVTVKVYLLGKDEAVKEVRRFAVDQDVSSSFEYLNRKTAGVFNNVKDFNMFYRDEDGDL
VAFSSDDELMMGLACMKDTTFRVYIKEKKEHRRDFPLHAFPPFTFGHPPPPPGAPLGPPP
HMAPPPALHPNVTCDGCEGPVVGTRFKCSVCPNYDLCSACQARGTHTEHALLPIWHPLQW
FPRGKWMKRMRHCMWNQNQNQNLSQDQDQDQDQPGSSKPAADSSTPSSSQANVDFLKNIG
EGVAAMLSPLGIDVDIDVEHEGQRTKVTPPPQGAASKVDMDVGGASDGGGVSGGSGANDV
GGASSDGGTSSEGLKVSRDSDEEWTHLSPREVDPSTGELQSLQPRDQDQNQDPPSGQQGP
PSGPTGLREAALYPHLPQEADPRLVESLSLMLSMGFTDEGGWLTRLLQAKNFDISAALDA
IQYAKQLRPHQP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgactgtgaaggtttacctgctggggaaagatgaggcggtgaaagaggtccgg
aggttcgcggtggatcaggacgtgtccagcagcttcgagtacctgaaccgcaaaactgca
ggagtgtttaacaatgtgaaggactttaacatgttctacagagatgaagatggagacctg
gtggccttctcctctgatgatgaactaatgatgggtttggcctgcatgaaagacaccacc
ttccgcgtctacatcaaagagaagaaggagcaccgccgtgacttccctcttcacgccttc
cctcccttcacctttggacatcctcctcctccacccggagctcctctgggcccgccccct
catatggccccgccccccgccctgcaccctaatgtcacctgtgacggctgtgagggtccc
gtggtgggaactcgcttcaagtgttcggtttgcccgaactacgacctgtgctccgcctgc
caggctcgagggacacacactgagcatgctctgctgcctatctggcacccgctgcagtgg
tttcctcgggggaagtggatgaagaggatgagacactgcatgtggaaccagaaccagaac
cagaacctgagtcaggaccaggaccaagaccaggaccagcccggatcctccaaacctgct
gctgacagcagcaccccctcttcctcacaggccaacgtggacttcctgaagaatattgga
gagggcgtggccgccatgttgagcccactgggtatcgacgtggacattgatgtggagcat
gagggccagaggaccaaggtgactccgccccctcagggagcggcgtcaaaggtagacatg
gatgtgggtggggccagtgatgggggcggagtcagtggtggaagtggagcaaatgatgtg
ggtggagccagcagtgatggtggaaccagcagcgaggggttaaaggtgagcagagactct
gacgaggaatggactcacctgagcccgagagaggtcgacccctccactggagagctgcag
tcccttcagcctagggaccaggaccagaaccaggatcccccgtcaggacagcagggtcca
ccatcaggaccaacaggtctgagggaggcagctctgtaccctcacctgcctcaagaggcc
gacccccgcctggtggagtccctgtctctgatgctgtcgatgggcttcacagatgaaggc
ggctggctgactcgtctccttcaggccaaaaacttcgacatcagcgccgcactcgacgcc
atccagtacgccaaacagctccgcccacaccagccctga
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