Larimichthys crocea (large yellow croaker): 104938637
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Entry
104938637 CDS
T04659
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104938637
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104938637
BRITE hierarchy
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GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
104938637
NCBI-ProteinID:
XP_027137388
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Position
VIII:33172484..33233080
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AA seq
1252 aa
AA seq
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MTEPEKDGGGGKSGSKKEKDQSWIPKIIKKRVCTSFVEDSFSNGAMCQCGGVRELHDSVA
TGDFFGAAIVTQWDSRQHSSEYPTDAFGELQFAGAGHRHSHFLRLSCETEPEIIYTMMTT
HWGLPSPNLVVSVVGGDGHDKIKKWVRDILRNGLVRAAQSTGAWILTGGLREGITRCVCE
AVRDHGAAAPTLSQKKVIAVGVAPWGLVHNRQQLVSAQGSFPARYYVQNTSHDSYCLDNN
CQAFLLVDDGSAGRWGGETSFRASLEDYISHQRTGIWGTGSIEIPVLCMLIAGNANMLER
IDASLKKAVPWLVLAGSGPAADLISELLDNLFSVALSPTSPPADGEAAEVLSTELRDWVH
DKVRRHFPAEAELEKLINRALSIYQNRELITIFHGEQEGSDDFDTVLLKALVRASKRVAS
NASEYTEELKLAVAWNRVDIARTELFSGDIQWKYEDLEDSMTDALVNDKPQFVRLFCENG
LNILDYLTYGRLESLYHSLSDSSLTYSLLQRRLSERQSLAGSLSNMDGAVTGPLKTPQSA
LSGPATMKLSLYEVSRLLWDLLGDVSQPFYYGPLGLDHSISTRRALKQVNKMQQEECLYR
DQRCLSPWASLFIWAVLQNRSEMAVSFWEMAGESVLSALCGCKMLRELSKLESETESKLA
MKELAQKFENLAQDVFGECYQSSESRSFTLLIRKSPVWGGATCLQMATAADARLFFSHDG
VQSLLSQIWWGDMDRSTEVWKLVLTFFMPPLLYINLISFREQDEESVEVHHVRDTESLDG
NDATIFSLADIIQNEEDVEEFRALKEKLNESSPSNSRRPFIVSRWRQFWFAPVTSFLGNV
LMYFLFLCLFAYVLLVDFKRPPPEGPATLEFVLYFWVFTLVCEEIRQTFFLGSTFVFQRM
RNYIQDVWNKCDLTAIGLFILALCCRMFSWSYEFGRAVMAIDFMVFTLRLIHIFVVHKQL
GPKIIIVGKMVKDVFFFLFFLAVWLLAYGVANQALLYSYDPRPGWIFRRVFYRPYLHIFG
QIPIHEMDADKLEEKMCTNNITRIEAGEEPCLNTFANWLVVILLVIYLLFTNIVLVNLLI
AMFSYTFSKVQERSDTYWKFQRYNLIVEYHSRPCLAPPFIILSHLNLLIKRYIRRIPSVK
SRHFVLELRGRKASRLNTWEAIQKENLLSAQNKRQRDSDTARLKCTSAKVDSVLKQMTEI
RDHDRRLRQLETELEYCCSALSWMTDALSQSSLIKTGRPPPLLRDTTQMSPS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccggagaaagacggaggaggtggaaaatcaggaagtaagaaagagaaggat
cagagctggattcccaagatcatcaagaagagagtgtgcaccagttttgttgaagactcc
ttcagcaatggagcgatgtgtcagtgcggtggtgtgcgggagctccatgactctgtggca
acaggggacttcttcggagcagctattgtcacccagtgggacagcaggcagcactcttca
gagtatcccactgacgcctttggagagctgcagtttgccggcgctggacacagacacagc
cattttctgcggctgtcatgtgaaactgagcctgagatcatctacaccatgatgacgact
cactggggcctgccctcacccaacctggttgtgtcggtggtggggggtgatggccatgac
aagatcaaaaaatgggttagagatatcctgagaaacgggctcgttagggcagcacagagc
acaggggcctggatcctaacagggggactgagggaaggcataacccgctgtgtgtgtgag
gcggtgagggaccatggggctgcagctccaactctctcccagaagaaagtgattgctgtg
ggagtggcaccctggggcctggtgcacaacaggcagcagcttgtcagtgcccaggggagc
ttccctgctcgttactacgtccagaacacatcccatgattcttattgtctggacaacaac
tgccaagctttcctcctggtggatgatggaagtgctggccgttggggaggagagacaagc
tttcgtgctagtctggaggactacatttcccatcagcgcactggcatttggggtactggc
agtattgaaatcccagtgctatgcatgctcatcgcaggaaatgcaaatatgctggagaga
atagacgcctctctaaagaaagctgtgccctggttggttcttgcgggttctggtccagct
gcagacctcatcagtgagctgctggacaatctcttctctgttgccctcagccccacctct
cctccagcagatggtgaggctgctgaggttctcagcacagagctccgtgactgggtccat
gacaaggtccgaagacacttcccagctgaagcagagctggaaaaactcatcaatagggct
ctgagtatttatcagaacagggagctgatcaccattttccacggggaacaggagggttct
gatgattttgatacagttctgctcaaagcccttgtaagagcaagtaaacgtgtggccagt
aatgccagtgagtacactgaagagctgaaactggctgtggcctggaaccgagtggacatc
gccagaactgagctcttcagtggagacatacagtggaagtatgaggaccttgaagactcc
atgacagatgcactggtcaatgacaaaccccagtttgtgcgtctcttctgcgagaatggc
ctgaatatcctggactatctcacatacggccgcttggaaagcctgtaccactcgctgtca
gacagctcactgacctacagtctgctccagaggcgtctgagcgagaggcagagcttggct
ggatccctgtccaacatggatggagctgtgacaggacctctgaagactccacagagtgca
ctatctggacctgcaacgatgaagctcagcctgtatgaggtgtcccgcctactctgggac
ctgttgggtgatgtctctcagcctttctactatggacctctggggctggaccatagcatc
agcactaggagggctcttaagcaagtcaataagatgcagcaggaggagtgtttgtaccgg
gaccagcgctgcctctcaccctgggcatccctcttcatctgggccgtcctgcagaaccgc
agtgaaatggctgtttccttctgggaaatggcaggagagtcagtgttgagtgctctgtgt
ggatgtaagatgctcagagaactttccaaactggagagtgagactgagagcaagcttgcc
atgaaggaactggcccaaaagtttgagaatctggcacaagatgtatttggtgagtgttac
cagagcagtgagagtcgttccttcactctccttataaggaagtcaccagtgtggggcgga
gctacgtgcctgcagatggccactgcggctgacgcccgcctgttcttcagccacgatggt
gttcagtctctgctgtctcagatctggtggggcgacatggacagaagtactgaggtttgg
aaactggttctcaccttcttcatgccccccctcctctacataaaccttatcagcttcagg
gaacaagatgaggaatctgttgaggtccaccatgtcagagatactgaaagtctggatggg
aatgatgccacaatcttctccctcgctgacattatacaaaatgaggaagacgttgaagaa
ttcagggctctaaaagaaaagttgaatgagtcttcgccatccaactccaggagaccattt
attgtgtcacggtggagacagttctggtttgcccctgtcacctcattccttggcaatgtg
ctgatgtacttcctgttcctctgcctgtttgcctatgttctgttggtggacttcaagcgc
ccaccccctgaaggccccgcaactctggagtttgtgctgtacttttgggtgttcacctta
gtatgtgaagagattcgtcagaccttctttttgggcagcacttttgtgttccagcggatg
aggaactacatccaggatgtgtggaacaagtgtgatcttacagctattggtctcttcatt
ttggctctgtgctgcagaatgttctcctggtcatatgagtttggcagagctgtgatggcc
atagattttatggtcttcacactacgtctgatccatatctttgttgtccacaaacaactc
gggcccaagatcatcattgttggcaaaatggtgaaggacgttttcttcttccttttcttc
ctggctgtatggctcctggcctatggagtggccaatcaggcgctcctctactcgtatgat
ccccgtcctggttggatattccgccgagtgttctacagaccatacctgcacatttttgga
caaatacctatacatgaaatggatgctgataaattggaagaaaaaatgtgcacaaacaac
atcacacgaattgaagcaggagaggagccctgtctgaacaccttcgccaactggctggtt
gtcatcctcctcgtcatctacctgctgtttactaacatagtactggtcaacttactcatt
gctatgttcagctacaccttctccaaagtacaggagcgcagtgacacctactggaagttt
cagcgttacaacctgattgtggagtaccactcaaggccctgcctggcaccacccttcatt
atcctgtcacacctcaaccttttgatcaagagatacatccgccgcatcccttcagtcaag
agcagacactttgttttggagctgcggggcagaaaggccagtcgcctcaacacatgggag
gctatccagaaagaaaacctcctctcagctcagaataagcgacagagggatagtgacaca
gcacgacttaaatgtacatctgccaaggtggacagcgtgctgaagcagatgactgagatc
cgtgaccatgaccgaaggttgcggcagctggagacggagctggagtactgctgtagcgct
ctctcctggatgacagatgctctatctcagagcagtctgataaagactggccgtccacct
ccactcctcagagatacaactcaaatgtctccaagctga
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