Larimichthys crocea (large yellow croaker): 104938662
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Entry
104938662 CDS
T04659
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04210
Apoptosis
lco04217
Necroptosis
lco04510
Focal adhesion
lco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104938662 (xiap)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104938662 (xiap)
04217 Necroptosis
104938662 (xiap)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104938662 (xiap)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104938662 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104938662 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104938662 (xiap)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104938662 (xiap)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104938662 (xiap)
Peptidases and inhibitors [BR:
lco01002
]
Peptidase inhibitors
Family I32: IAP family
104938662 (xiap)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104938662 (xiap)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104938662 (xiap)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
104938662
NCBI-ProteinID:
XP_027141381
LinkDB
All DBs
Position
I:40649909..40657415
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AA seq
466 aa
AA seq
DB search
MCDLRQDSNWQTDHQDDFSLINSRLDSFRGSSLAQQVSAERLARAGFYYTGHADRVRCFS
CQKTVENWCRGDTPVERHKEVSPSCRFLSCTHRTLFNSIPDNTLTNGSTYNEEAEDMEFR
LRTGEVVDETTYPMAPHMSSEEARLQTFTSWPSTAPVRSRDLAQAGLYYLGESDQVQCFC
CGGMLAGWETGDTAWGEHTKHFPYCFFILGHDVGNIPFQGDMEEESDNRRHAETHVAMGS
FEERLGSFAGVQHPIDPERLARAGFYSTGTGDKALCFHCGGGLKSWQPDEDPWEEHAKYY
PGCSFLLAEKGQEFVNHIQLQYPLRNGATSSHQNGFSGDRNEVLRSTMAQKAIELGLEPS
VVERTILEKISKTGSGYSSLEELLEDGFNNTPQSDAAQAENQDEDPLESLRRLQRERQCK
ICMDRDIGIVFIPCGHLVSCKQCSVSLIKCPICCGAITQKIKTYNA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatctccgacaagacagcaactggcagacggatcaccaggatgatttttcccta
attaacagtcgcctggattccttccgtggctccagcctggcccagcaggtgtcagcagaa
agattggctcgggccggcttctactacactggccatgccgatcgtgtccgctgtttcagc
tgccagaagacggtggaaaactggtgcaggggagacacacctgtagagcggcataaggag
gtttccccatcatgcaggtttctcagctgcacccaccgcactcttttcaactcaattcct
gacaacacactgactaacggttccacctacaatgaagaagcagaggacatggagtttcgt
ttgagaacaggagaggtggttgatgagaccacctatccaatggcccctcacatgagtagt
gaagaggcccggctccagaccttcacttcatggccttctactgcacccgtgagatcacga
gacctcgcccaagccggcctctactacttaggggagagtgatcaggtgcagtgtttttgc
tgtggtggcatgctggccggctgggagacgggagacacggcctggggagaacacaccaaa
catttcccctactgcttcttcatcctcgggcacgatgtgggcaacatcccattccagggc
gatatggaggaggagtctgacaataggcggcatgcagaaactcatgtcgctatgggaagt
tttgaggagaggcttggtagctttgcaggtgtccagcaccctatagaccctgagaggctt
gccagagctggcttctacagcacagggacaggagacaaggcgttgtgtttccactgtggt
ggaggtttgaaaagctggcagcctgatgaagacccttgggaagaacatgccaagtactac
cctggatgcagcttcctgttggcagagaaaggacaagaatttgtcaaccacatccagctg
caataccctctccgaaatggagctacttcaagtcatcagaatggattttcaggagacagg
aatgaggtgctgcggtccaccatggctcagaaggccatagagttgggtctggagcccagt
gtggtggaaaggaccatcttggagaaaatcagtaagacaggctccggctactccagcctg
gaagaactcctggaggatggtttcaacaacacaccccaaagtgatgctgctcaggcagag
aatcaagatgaggacccactcgagagtctacggaggctgcagagggagagacagtgcaaa
atatgtatggacagagatattggtattgtcttcattccatgtggacatctggtcagctgt
aagcagtgctcagtgtcgctcatcaagtgtccaatctgctgcggagccataacacagaag
atcaagacctataacgcttaa
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