Larimichthys crocea (large yellow croaker): 104938662
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Entry
104938662 CDS
T04659
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04210
Apoptosis
lco04217
Necroptosis
lco04510
Focal adhesion
lco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104938662 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104938662 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104938662 (xiap)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104938662 (xiap)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104938662 (xiap)
Peptidases and inhibitors [BR:
lco01002
]
Peptidase inhibitors
Family I32: IAP family
104938662 (xiap)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104938662 (xiap)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104938662 (xiap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
104938662
NCBI-ProteinID:
XP_027141381
LinkDB
All DBs
Position
I:40649909..40657415
Genome browser
AA seq
466 aa
AA seq
DB search
MCDLRQDSNWQTDHQDDFSLINSRLDSFRGSSLAQQVSAERLARAGFYYTGHADRVRCFS
CQKTVENWCRGDTPVERHKEVSPSCRFLSCTHRTLFNSIPDNTLTNGSTYNEEAEDMEFR
LRTGEVVDETTYPMAPHMSSEEARLQTFTSWPSTAPVRSRDLAQAGLYYLGESDQVQCFC
CGGMLAGWETGDTAWGEHTKHFPYCFFILGHDVGNIPFQGDMEEESDNRRHAETHVAMGS
FEERLGSFAGVQHPIDPERLARAGFYSTGTGDKALCFHCGGGLKSWQPDEDPWEEHAKYY
PGCSFLLAEKGQEFVNHIQLQYPLRNGATSSHQNGFSGDRNEVLRSTMAQKAIELGLEPS
VVERTILEKISKTGSGYSSLEELLEDGFNNTPQSDAAQAENQDEDPLESLRRLQRERQCK
ICMDRDIGIVFIPCGHLVSCKQCSVSLIKCPICCGAITQKIKTYNA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatctccgacaagacagcaactggcagacggatcaccaggatgatttttcccta
attaacagtcgcctggattccttccgtggctccagcctggcccagcaggtgtcagcagaa
agattggctcgggccggcttctactacactggccatgccgatcgtgtccgctgtttcagc
tgccagaagacggtggaaaactggtgcaggggagacacacctgtagagcggcataaggag
gtttccccatcatgcaggtttctcagctgcacccaccgcactcttttcaactcaattcct
gacaacacactgactaacggttccacctacaatgaagaagcagaggacatggagtttcgt
ttgagaacaggagaggtggttgatgagaccacctatccaatggcccctcacatgagtagt
gaagaggcccggctccagaccttcacttcatggccttctactgcacccgtgagatcacga
gacctcgcccaagccggcctctactacttaggggagagtgatcaggtgcagtgtttttgc
tgtggtggcatgctggccggctgggagacgggagacacggcctggggagaacacaccaaa
catttcccctactgcttcttcatcctcgggcacgatgtgggcaacatcccattccagggc
gatatggaggaggagtctgacaataggcggcatgcagaaactcatgtcgctatgggaagt
tttgaggagaggcttggtagctttgcaggtgtccagcaccctatagaccctgagaggctt
gccagagctggcttctacagcacagggacaggagacaaggcgttgtgtttccactgtggt
ggaggtttgaaaagctggcagcctgatgaagacccttgggaagaacatgccaagtactac
cctggatgcagcttcctgttggcagagaaaggacaagaatttgtcaaccacatccagctg
caataccctctccgaaatggagctacttcaagtcatcagaatggattttcaggagacagg
aatgaggtgctgcggtccaccatggctcagaaggccatagagttgggtctggagcccagt
gtggtggaaaggaccatcttggagaaaatcagtaagacaggctccggctactccagcctg
gaagaactcctggaggatggtttcaacaacacaccccaaagtgatgctgctcaggcagag
aatcaagatgaggacccactcgagagtctacggaggctgcagagggagagacagtgcaaa
atatgtatggacagagatattggtattgtcttcattccatgtggacatctggtcagctgt
aagcagtgctcagtgtcgctcatcaagtgtccaatctgctgcggagccataacacagaag
atcaagacctataacgcttaa
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