Larimichthys crocea (large yellow croaker): 104938731
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Entry
104938731 CDS
T04659
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104938731
Membrane trafficking [BR:
lco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104938731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
104938731
NCBI-ProteinID:
XP_027130772
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All DBs
Position
XXIV:complement(1751014..1767310)
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AA seq
1788 aa
AA seq
DB search
MKRSKHRGHKEDKHGDEPAILETENLDRQFMGGGPDPDTISLASVTAVTTNVSNKRSKPD
IKMEPSSGRPVDYQVSVTVIEARQLVGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNEYF
VFDFHIPPDVMFDKILKLSVIHSKNLLRSGTMVGSFKLDVGTIYSQPEHQFYHKWALLSD
PDDIAAGCKGYIKCDIAVVAKGDTMKTPHKTSESDEDDIEGNLLIPEGVPAERQWARYYL
KIYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNEQ
IVFTEMFPPLCKRMKLQIRDSDKVNDVAIGTHFLDLRKISNDGDKGFLPTLGPAWVNMYG
STRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPEITSSTEVQLEGVPNISE
TATGKIEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEIDGVAKPQTKSRKGGGDD
EESDLIHNSSEEEMDDDGDLTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQR
RRLYNANIIDNIADKLEDGLNDVQEIIKTEKAYPERRLRGVLEELSHGCSQFLALANKDQ
NQSGRTKLDRERLKLCMADVENIGQQAKAMRSQVKKSTVKDKIKLSQNFLTKLRFLADEP
QHSVPDVFIWMISNGKRIAYARVPSKDILFSNTEEETGKDCGKVKTLFLRIPGKKGFGPA
GWTVQSKIEIYLWLGLTKQRKDYLNGLPNGFEENKLSKGPGLPCSPPISLTYMMKQIFQL
RVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVELFGEA
TELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRGN
CTAGEMLAAFELLQIGPNGKADLPPIDGPTDYDRGPILPVPLGIRPVLSRYRIEVLFWGL
RDLKRVNLAQVDRPRVDVECAGRGVQSSLIPNYKKNPNFSTLVKSFEVDLPENELLHPPL
NIRVVDCRAFGRYTLVGSNAVTSLRKFIYRPNDKQANNWTTTEEIIVVSMDSDRGHKKME
TVVKLDSCSDAVVKVEDDDGKGKKKKRKKGDEIEEEELDESMLDWWSKYFASIETLTEML
KAQEAAFSDSEDKDEMDIADGGDIKPDDFPVKGTKRGKGKKDKKKSIDAFERRKPKLDEL
KVYPKELESEFENFEDWLHSFNLFRGKGGDDDDQNVLDEDRIVGRFKGSMCMYKVSDDMP
RDMNVDSNMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIRLGKNEIKDK
ENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRFYSKHR
ATCGITSNYAIHGYNVWRDPMKPTQILARMCKEGKLDGPHYGPPGRVKVENRVFMAPTEI
EDENGLKKQTDEHLALTVLKHWNEIPKVGCKLVPEHVETRPLLHPDKPGIEQGRIEMWVD
MFPKDMTAPGPALDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQ
QEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYKIPARLN
LQVWDADHFSADDFLGAIELDLNRFPRGAKTPKQCTIEMVTNEGDLPMVSIFKQKRIKGW
WPFVARNEEDEFELTGKVEAELHLLTGEEAEKSPAGEGRNEPEPLEKPNRPDTSLLWFLT
PFKAIKHLICNQYKWLAIKIVTALLLLVMLGLFLYSMPGYMVKKMLGA
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgcggacacaaggaggacaaacacggagatgagccagctatt
ctggagacagagaacctggatcgtcagttcatgggaggaggcccggatcccgacaccatc
tctctggcttcagtcacagcagtcaccaccaatgtatcaaataagagatcaaagccagac
ataaagatggagcccagttctggaagaccagtagattatcaagtcagtgtgactgtgatt
gaagccaggcagctggtgggactgaacatggatccaatggtctgtgtggagatcggagag
gataagaagtacacctcaatgaaggaatcaaccaactgcccatactacaacgaatatttt
gtgttcgacttccacatccctccagatgttatgttcgacaaaatcctgaagttgtccgtc
attcactccaaaaatcttctgcgtagcggaacaatggttggatcttttaaactggatgtt
ggcacaatctactcccagcctgaacatcagttttaccacaagtgggctttgttgtctgac
cctgatgacattgcagcgggttgcaaaggctacattaagtgtgatattgcagttgtggcc
aaaggagacactatgaagactccacacaagaccagtgaatcagatgaagatgacatagag
gggaatctcttgataccagaaggggtgcccgcggagcgacagtgggctcgttattatctg
aagatatacagagctgaagggcttcccagaatgaacaccagcatcatggccaacgtcaaa
aaggccttcataggagaaaataaagacctggtcgatccttatgttcaagtactatttgca
gggcagaaggggaagacatcagttcaaaagagctgctatgagcctatctggaacgagcaa
attgtcttcaccgagatgtttccaccgctgtgcaagcgcatgaagctccagatccgtgac
tcagacaaagtgaatgatgttgctatcggaacacacttcctggacctgcggaagatttcc
aacgatggggacaaaggcttcctccccacactgggacctgcctgggttaacatgtacggt
tccactcgtacttacaccctgatggacgagtaccaggagttaaacgaagggctcggagag
ggagtgtccttcagggcgcgtctgctcatcagcctgggtgtggagatcctggacccctcc
tcgcctgagatcaccagctccacagaggtgcagctggagggagtacccaacatctcagag
actgctaccgggaagattgaagagtttttcctctttgggtcttttctggaggccacaatg
attgacagaaagattggtgataagcccatcaactttgaggtcaccataggttactatgga
aacgagatagatggggtcgcgaagccgcaaacgaagagcaggaaggggggtggtgacgat
gaggaaagtgacctgatccacaactccagtgaggaggagatggatgacgacggagacctg
acctctgtggcgactactcctcccatgaaacccgtcatcactgaccgaaactacttccac
ctgccgtatttcgagaggaagccgtgcatctacatcaaaagttggtggcaggaccagaga
aggaggctgtacaatgccaacatcatagacaacatcgcagataaactggaggatggactg
aacgacgtgcaggagatcatcaagacagagaaggcctatcctgagcgcagactgagaggt
gtccttgaggaactcagccacggctgcagtcagttccttgcactggcaaacaaggaccag
aaccagtctggcagaaccaaacttgaccgggagagactgaagctgtgcatggcagacgtg
gagaacatcgggcagcaagctaaagccatgaggtcacaggtgaagaaaagcacggtgaaa
gacaaaatcaagctgtctcaaaacttcctcacaaagctgcgcttcctggctgacgaacct
caacacagcgttcctgatgttttcatatggatgataagtaacgggaagcgcatcgcgtac
gcacgcgttccttccaaagacatccttttttccaacacagaggaggagacaggaaaggac
tgtggcaaagtcaagacactcttcctgaggatccctggtaagaaaggtttcgggcctgct
ggctggacagtccagtccaagatcgagatttatctgtggctgggtctgactaaacaacgc
aaagactacctgaacggcctgcccaatggatttgaggaaaataagctgtccaaaggacct
ggtctgccatgctcacctcccatcagcctcacctacatgatgaagcagatcttccagctg
agggtccacatgtaccaagctcgcagcctgtttgctgcggatagcacaggtctgtctgat
ccctttgcgagagtcttcttctcgacacaaagccaggtcactgaggtgctggcagagact
ctgtgcccgacatgggaccagctgctggtcttcgagaacgtggagttgttcggagaggcc
accgaactgagagacgaccctcctatcattgtcatcgagatttatgatcaagacacagtg
ggtaaagctgactttatgggcaggacattcgccaagcctgtagtgaagatggcggacgag
cactatggtccaccacgcttccctccccagctggagtactatcagatctaccgagggaac
tgcaccgctggagaaatgctggcagcctttgaactgctgcagattggccccaatgggaaa
gctgacctgcctcccatagacggtcccacagattacgaccgaggccctatcttgcctgta
ccgctggggatcagaccagtgctcagcagatacaggattgaggttttgttctggggcttg
agggacctgaagagggtgaatctggctcaggtggatcgccctcgtgtggacgttgaatgc
gccggaaggggagtacagtcttccctcatccccaactacaagaaaaaccccaacttcagc
actcttgtcaagtcttttgaagtggatttgcctgagaatgagttgcttcacccgccgctg
aacatccgagtggtggactgcagggcttttgggcgctacactctggttggctccaatgct
gtcaccagcctgcggaagttcatctacaggccgaatgacaagcaggccaacaactggacc
actacagaggaaattattgtcgtcagcatggactctgatcgtggtcataagaagatggaa
actgtggtcaaactagactcttgctccgatgcggtggtcaaggttgaggacgacgatgga
aaggggaagaagaagaagaggaagaagggcgatgagatcgaagaggaggaacttgacgag
agcatgttggactggtggtccaagtatttcgcctccattgaaactttgacagagatgctc
aaggctcaagaagctgctttctccgattcggaggataaagatgagatggacattgcagat
ggcggagatatcaaacccgatgactttcctgtgaaaggcaccaagcgaggaaaagggaag
aaggacaaaaagaagtcaatagatgcgtttgagaggagaaagccaaagctggatgagctg
aaggtgtacccaaaggaactggagagtgaatttgaaaactttgaggactggctgcacagt
ttcaacctgttccgagggaaaggaggcgatgacgacgaccaaaatgtgttggatgaggac
agaattgtcggaagattcaaaggctctatgtgcatgtacaaagtgtcggatgacatgccc
agagacatgaacgtggactccaacatgggaatgtttcagaacattcctcacaacgatccc
atcaatattctcgtccgcatctatgtgatcagggcgactgatctgcacccagctgacatt
aatgggaaagctgatccatacattgcaatcagactgggaaagaacgagatcaaggacaaa
gagaactacatctcaaaacagctgaaccccttgtttggcaaatcctttgacgtggaggcc
acattcccaatggattccacactcaccgtatcaatctacgactgggacctggtgggaacc
gatgatctgattggagaaaccaaaattgaccttgagaaccgtttctacagcaaacacaga
gccacatgtggtattacgagtaactacgccatccatggttacaacgtgtggcgagaccca
atgaaaccgacccaaatcctggctaggatgtgcaaggaaggcaaactggacgggcctcac
tacggccctccaggtagagtgaaggtggagaatcgtgtcttcatggcaccgactgagata
gaggatgaaaatggtctgaagaagcagaccgatgaacatctggctctgactgtgttgaag
cactggaatgaaatcccaaaggtcggctgcaaacttgtcccggaacacgtggaaaccaga
ccactgctccaccctgacaaaccaggaatcgaacaagggagaattgagatgtgggtggat
atgttccccaaagacatgactgcacctggccccgcacttgacatttcaccaaggaaacca
aagaagtttgaactgagggtgattgtctggaacacagatgaggtcgtcctggaggatgat
gatatcttcactggggagaaatcgagtgacatatttgtgcgaggttggttgaaggggcag
caggaggacaagcaggacacagacgtccactaccactccatcactggagagggcaacttc
aactggcgcttcgtctaccccttcgactacctcatggctgaagagaagatcgtcatctca
aaaaaagagtccatgtttgcctgggatgagactgaatacaagatccctgctcgactgaat
ctgcaagtgtgggacgctgaccatttctctgcagatgacttcttaggtgcaattgagctg
gacctgaaccgttttccacgtggtgcgaagacccccaagcagtgcaccatcgagatggtg
acaaatgaaggagacctgcccatggtctccatcttcaaacagaagaggatcaagggctgg
tggccattcgtggccagaaatgaagaggatgagtttgaactcacgggaaaagtggaagca
gagctgcatctcctgacaggcgaggaagcagaaaaaagcccagcgggtgaaggacgcaac
gaaccagagcccctggagaaacccaaccgccccgacaccagccttctgtggttcctaact
cccttcaaagccataaaacacttaatctgcaaccagtacaagtggctggccatcaagatt
gtcactgctctcctgctgctggtcatgctgggtcttttcctctacagcatgcccggttac
atggtcaagaaaatgctgggagcttga
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integrated database retrieval system
