Larimichthys crocea (large yellow croaker): 104940382
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Entry
104940382 CDS
T04659
Symbol
gli2
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104940382 (gli2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104940382 (gli2)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
104940382 (gli2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf_C2H2_ZNF292
AAA_lid_2
Motif
Other DBs
NCBI-GeneID:
104940382
NCBI-ProteinID:
XP_019115971
LinkDB
All DBs
Position
I:4720651..4799899
Genome browser
AA seq
1529 aa
AA seq
DB search
METSAPTATEKKECKGSGLDGSSFSEIPKKPSPTTLTRGAHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGPPGLTGSPVISDISLIRLSPHAAPGTGESPFSPPHPYVSPHMEHYL
RSVHGSPTLSMISAARGLSPAEVTHEHLKDRALFSLPPPPPGANPTEYYHLMASASQRSP
YGDLLMQSSAAAAAAAAAAAAAAAAHLPDYISPVDVSRFSSPRLTPRLSRKRALSISPLS
DASIDLQTMIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGMSPSFSFPPHINPVAYQQL
LSQQRGLNTFGHTPPLIQPSPSSFSARQHPLTASAMSTSHNSSNSEANQNASGDPAVSST
VNPLTTKRSKVKTETEGPLPISPSSQDHGGGILDLSEDLDKDECKQEPEAIYETNCHWEG
CTKEYDTQDQLVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPH
KCTFEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKP
YVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRSDAPPRLQPPKGNGENEANSKLS
ARGVDGKIEANSNSRGVEDCLQVKSIKTENSMTYQSSPGGHSSCSSEPSPLSSANNNDSG
VEMAMHSGGSFGDLSAQDECPMVDSTVPAAGQQAGMGLQLRKAVSHGGGVTIKLENIKKE
RLKTVRDACPWVNSAPQPLQGQRNSMKLPPIPAVGSLLESSNVMSNLSSSYPSQRIGDLS
SCEVTLLNQLNERRDSTTSTISSAYTMSRRSSGISPCYSSRRSSEASQFGANRHNNISSA
DSYDPISTDLSRRSSEASHCGGGGVSGGGGGGLPSLLSLTPAQHYRLKAKYAAAIGGAPP
TPLPNMDRMSLRTRMALYNDSQEGSSHPFHQPPSGTVPRRCSDIGYGTQSMMPHEVPTNL
PRRASDPVRRPTLDPLSFPRVQRYNSMNNMNPMNGPSAERHQALAMQGYTRSDGSLQRYP
FAPRPPSISENVAMENMAVDGMMTGAEQTGDEDMVLPDDVVQYLRSQNSGPSGHNQAQVD
YHSSNQTQAYQTGMAPPASFYTQRRMAMVDATMTQSGQDMQSCQMGPGGSQQPFSPASDN
RNKNNMPVQWNEVSSGTVDTTTKLSKQQQHPLRGNLAVVQQRHNFGSLQGQGQGLGSNQQ
VVPMSQNMSVQGYVNHNSQRLMNISHQQQQQQRQCNNVNFGDQMSPQQGFGQEAVPNSIS
GSTSVRPTRNSMADPELQSYRARTQADGYSHVNQVDPQQNYSVVSQQQQQQHNIHNGGRG
MLQPRPPTEPKLIARQHTGSIMMQPSRIPKSSDLSPICGTDTSEASPKRPSGSATHNSNS
ENPNSAVFYTGQIHMFEPNSVNFETPMSPCASQAPASNTTAAANMASPGVNLVSSSTVDS
STGGSGGTEHAQIDFDTMLDDGDHSSLMSGTLSPGLLQSLSQNSSRLTTPRNSVTLASVP
AGIGNMAIGDMNSMLTALAEESKFLNLIS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atggagacttcagctccaacagccactgagaagaaggagtgtaaaggttcaggtctggat
ggaagcagcttctcagaaatcccaaagaagccctcgcccaccactttgaccagaggtgcc
caccacctcttccccacgtttcacacgcccatccccatcgacatgagacaccatgagggg
cgataccattatgagccacacccactccacgccatgcatggacctccaggactgacggga
agtccagtcatctcggatatttccttgatccgtttatcaccccatgcggcgcctgggacg
ggtgaatcacctttcagccctccacatccctacgtcagcccccacatggaacactaccta
cgctctgtacacggcagccccaccctctctatgatctcagcggcacgaggactgagccct
gctgaagtgacccacgaacacctgaaggaccgtgccctattcagtctcccaccaccacca
ccaggggccaaccccacagagtactaccacctgatggccagcgccagccagcgaagcccc
tacggtgacctgctgatgcaaagcagtgcagcagcagcggcggcggcggcggcagcagca
gcggcagcggcagctcatctgccagactacatcagtcccgtggatgtatcacgtttctcc
agcccacggttgacaccgcgactgagcagaaagagggctctgtccatctccccgctgtca
gatgccagcattgacctgcagaccatgatccgcacctcaccgaactccctggtggcctac
atcaacaattcccgctccagctcggctgccagcagctcctatgggcacctttcagtcgga
gggatgagtccctcattcagcttccctcctcacatcaaccctgtggcgtaccagcagctg
ttgtcccagcagaggggtcttaacaccttcggccacacacctcctctcattcaaccatca
ccgtcctctttctctgctcgccaacaccccctcactgcatcagctatgtccacctcccac
aacagctccaactctgaggcaaaccagaatgccagtggagacccagcagtgagtagcaca
gtcaacccactgaccacaaagaggtcgaaggttaaaacggaaacagaaggtccactgccc
atctcaccgtcctctcaggaccatggtggggggatcttggacctgagcgaggatctggat
aaagacgagtgcaaacaggagcctgaggccatatatgaaaccaactgccactgggagggc
tgtacaaaggagtatgacacccaggaccaacttgttcatcacatcaacaacgaccacatc
cacggtgagaagaaggagtttgtgtgtcgatgggatgagtgttcgcgggagcagaagccc
ttcaaggctcagtacatgctggtggtccacatgaggcgtcacacgggggagaagccgcat
aaatgcacatttgagggctgcgcaaaggcttattctcgcctggagaacctcaagacacac
ctgaggtcccacaccggtgagaagccgtatgtttgtgaacatgaaggctgcaacaaggcc
ttctccaatgcctcagaccgggccaagcaccagaaccgcacacattctaatgagaaacca
tatgtgtgtaagatcccaggctgtaccaaacgctacacagaccccagctctctcaggaag
catgttaagacggtccacggccccgaagcccacgtcaccaagaaacaacggagcgatgca
cctccgaggctgcagccacccaaaggcaacggggagaatgaggcgaattccaagctcagc
gcaagaggtgtggacggcaagattgaggccaacagcaactctagaggagtggaggactgc
ctacaagtcaaatctatcaagactgagaattctatgacatatcagtccagtcctggtggc
cactcgtcatgtagcagcgagccatcacctctaagcagcgccaacaacaacgacagtggg
gtagaaatggccatgcacagcgggggcagcttcggggacctcagtgcacaggatgagtgc
cccatggttgactccactgttcctgctgcgggacagcaggctgggatggggcttcagttg
aggaaagctgtgagtcatggtggcggcgtcaccatcaagctggaaaacatcaagaaggaa
aggctgaagacagtgagggacgcctgcccttgggtcaactctgcaccacagccactgcag
ggccaacgtaacagcatgaagctgcctcccatacctgcagtcggttccctgctggaaagc
tccaatgtgatgagtaatctaagcagttcgtaccccagccaacgcataggtgacctgtct
tcatgtgaagtaacactgctgaaccagctaaatgagcgccgtgacagcaccaccagcact
atcagctcagcctacaccatgagtcggcgctcctccggtatttcaccttgctattccagc
cgccggtccagtgaggcatcccagtttggtgctaaccggcacaacaatatcagttctgct
gactcctatgacccaatctccactgatctgtctcgccgctccagcgaggccagccattgt
ggaggaggaggtgtgagtggaggaggtggaggtggtctcccaagcctccttagtctgaca
ccagctcagcattatcgactcaaggcaaagtacgctgctgccattggtggagctccacct
actcctctccccaatatggatcgaatgagcctgaggacccgcatggcactctataatgac
tcccaggaaggttcatcacacccattccatcagcctccctctggtactgtgcctcggcga
tgcagtgatataggatatggcacacagagcatgatgcctcatgaggtacccaccaacctt
ccacgccgtgccagtgacccagtgcgtcgtcctacactggaccctctctcctttccaaga
gttcagcgctataacagcatgaacaatatgaaccccatgaatggtccatcagctgaacgc
caccaggcactagctatgcagggatacactcgctctgatggcagcctgcaacgctaccca
tttgcccccagaccacctagcatttctgagaatgtagccatggagaacatggcagtagat
ggaatgatgactggggcagagcagactggggatgaagatatggtgcttccagatgatgtg
gtgcagtacctcaggtcccagaattctggcccctcaggtcataatcaggcacaagtggac
taccattccagcaatcagactcaggcctaccaaacaggcatggccccaccagcatcattt
tatacacagaggaggatggctatggtggatgccacaatgactcagtctggtcaggacatg
caatcctgccagatgggtcccggtggttcccagcagcccttctcaccagcatcagacaac
aggaacaagaacaacatgccagtgcagtggaatgaggtgagctcaggaactgtggacacc
acaactaagctctccaaacaacagcagcaccctctcagagggaatctagctgttgttcag
cagaggcacaattttggttccttgcagggacaaggtcagggcctgggaagcaaccagcag
gtagtgcctatgagtcaaaatatgtctgtgcaggggtacgtgaatcacaacagccagagg
ctgatgaacatctcccaccagcagcagcagcaacagaggcaatgcaacaatgtgaacttt
ggagatcaaatgagtcctcagcaaggatttggccaagaggcagtcccaaattctatatct
gggagcactagtgtgagacctacccggaacagtatggcagatcctgaactgcagagttac
agagcaaggacacaggctgatgggtattctcatgtgaaccaagtggatccacagcaaaat
tacagtgttgtttctcagcagcagcagcagcagcacaacattcataatggaggcagagga
atgttacaacccaggcctcctacagaacccaagttgattgccagacaacacacaggatct
atcatgatgcaaccgagccgaatacccaagtcatctgatttgagccccatttgtggtact
gacacctcggaggcaagtccaaagaggcccagtgggtcagcaacccacaacagcaactct
gaaaatccaaactctgctgtgttctacacaggacagattcatatgtttgagccaaattct
gtaaactttgagacccccatgtccccctgtgccagccaggctcctgccagcaacaccact
gctgcagccaacatggcctcaccaggagtcaatctggtctccagcagtacggtggattct
tccactggtggatctggtggtacggagcacgcacaaattgactttgacacgatgctagat
gatggggaccactccagcctaatgtcgggcactctgagtcctggccttctacagagtctg
tcccagaattcctcacgtctcaccaccccccgcaactctgtcacccttgcatctgtaccg
gcagggattggcaacatggccattggtgacatgaactctatgctcacagctttggctgaa
gaaagcaagttcctcaatttgataagctga
DBGET
integrated database retrieval system
