Larimichthys crocea (large yellow croaker): 109141681
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Entry
109141681 CDS
T04659
Name
(RefSeq) transforming growth factor beta-1 proprotein
KO
K13375
transforming growth factor beta-1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04060
Cytokine-cytokine receptor interaction
lco04068
FoxO signaling pathway
lco04110
Cell cycle
lco04148
Efferocytosis
lco04218
Cellular senescence
lco04350
TGF-beta signaling pathway
lco04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109141681
04350 TGF-beta signaling pathway
109141681
04068 FoxO signaling pathway
109141681
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109141681
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109141681
09143 Cell growth and death
04110 Cell cycle
109141681
04218 Cellular senescence
109141681
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109141681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lco03110
]
109141681
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lco04052
]
109141681
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
109141681
Chaperones and folding catalysts [BR:
lco03110
]
Intramolecular chaperones
Others
109141681
Cytokines and neuropeptides [BR:
lco04052
]
Cytokines
Transforming growth factors (RSTK binding)
109141681
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Growth factors/receptors
109141681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF5623
VMAP-M5
Motif
Other DBs
NCBI-GeneID:
109141681
NCBI-ProteinID:
XP_027136266
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All DBs
Position
VII:26117333..26127822
Genome browser
AA seq
389 aa
AA seq
DB search
MKLAFLMLVAVYTVGNVSGMSTCKTLDLEMVKKKRIEAIRSQILSKLRLPKEPEPDQAGD
EEEIPTTLLSLYNSTKDMLKEQQTEVQTDISTEQEEEEYFAKVLHKFNMTSKNDTDANTK
SKSTKTIPMYFNITKIRESVGDYRLLTSAELRMLISHTTIADKQRVELYQGLGKSASYLF
SRFITNQWKHKWLSFDVTETLQEWIRKNYTEQAFELRLFCECSDTSSEAGFNFQISGLSG
SRGDTEVIRSMTQQPPYILTMSIPQNVSSHHSSRSKRSTETKDTCTAQTETCCVRSLYID
FRKDLGWKWIHKPTGYLANYCMGSCTYIWNTENKYSQILALYKHHNPGASAQPCCVPQAL
EPLPILYYVGRQHKVEQLSNMSVKSCKCS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcgttcttgatgctcgtcgctgtgtacacggtgggcaacgtaagcggcatg
tcaacatgcaagacgctggacctggagatggtgaagaaaaagcgcatcgaggccattagg
agccagatccttagcaaactgcgtttaccaaaagagcctgagccggatcaggctggggac
gaagaggagatccccaccaccctgttgtcactctacaacagcaccaaggacatgctgaag
gagcagcagactgaggtccagacagacatctccacagaacaggaggaggaggagtacttc
gccaaggtgctacacaagttcaacatgaccagtaagaatgacacagatgccaacaccaag
agcaagagcaccaaaaccatccccatgtacttcaacatcactaagatacgggagagcgtg
ggggattaccgcctgctgacgagtgcggagctacggatgctcatcagtcacaccacgata
gctgataagcagcgggtggagctgtatcagggtctggggaagtcggccagctaccttttt
tcccgcttcataactaaccagtggaaacacaaatggctgtccttcgacgtcacagagacc
cttcaggaatggatccgcaagaactatactgagcaggctttcgaactccggctgttctgt
gaatgcagcgacaccagtagcgaggctggcttcaattttcagatctctgggctatcgggc
agtagaggagacacagaagtaatacgatccatgacgcagcaaccaccgtacatcctgacc
atgtccatccctcaaaatgtcagcagccaccacagctcacgctcaaaacgctccacggag
acaaaggacacctgtacagcccagacagagacctgctgtgtgaggagcttgtacatcgac
ttcaggaaagatctgggctggaaatggatacacaagccaacgggataccttgccaattac
tgcatggggtcctgcacctacatctggaatactgaaaacaaatattctcagattttggcc
ttgtataagcatcacaacccaggagcctctgcccagccctgctgtgtcccccaggcactg
gagccactgccaatcctctactacgtgggcaggcaacacaaggtggagcagctgtccaat
atgagcgtgaagtcttgcaagtgtagctaa
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