Lysobacter capsici: LC55x_0549
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Entry
LC55x_0549 CDS
T04162
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lcp
Lysobacter capsici
Pathway
lcp01501
beta-Lactam resistance
lcp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC55x_0549
01503 Cationic antimicrobial peptide (CAMP) resistance
LC55x_0549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcp03036
]
LC55x_0549
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0549
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_0549
Chromosome and associated proteins [BR:
lcp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LC55x_0549
Transporters [BR:
lcp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LC55x_0549
Antimicrobial resistance genes [BR:
lcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LC55x_0549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CPT
Motif
Other DBs
NCBI-ProteinID:
ALN83849
LinkDB
All DBs
Position
complement(619106..620251)
Genome browser
AA seq
381 aa
AA seq
DB search
MNRSIRVSHPLDRAGLSLALAAALLTVLAGCSRSDAETTPANALPEVLTVQAKAADAAFD
LSLPARAQAGESAQLYARATGFVSERKVELGDKVDAGQVLATISAPEIDQSVREARALLA
QTAADQELAKVNYDRAQALIGTGAVSKEYFSDRKGNYDVAVAARNAAQARLTSALERQSF
QSVRAPFAGVVVARNVERGDRVVGDSASSTVPMFEIAVLDPLRVVVDVPQNVSMQIQNGL
EADVSFPELPGQVFKAQVARSARTLSRDAGVMRTELRLPNPDSRIPAGMVGSARLHLPRV
APAVVLPVSTVIQRATGVQVVTLKADSTLSYRDVTLGRNLGNEVEVLTGIQAGDTVVLAP
NALLADGNKVHAKALPPPKKS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctcgatccgtgtctcccacccgctcgaccgggccggcctgagcctcgccctc
gccgccgcgctgctgaccgtgctcgccggctgcagccgcagcgacgccgagaccacgccg
gccaacgccctgcccgaagtgctcaccgtgcaggccaaggccgccgatgccgcctttgat
ctgtccttgcccgcgcgcgcgcaggccggcgagtcggcgcagctgtacgcgcgcgcgacc
ggtttcgtcagcgaacgcaaggtcgaactcggcgacaaggtcgacgcgggccaggtgctg
gcgacgatctcggcgccggaaatcgatcagtcggtgcgcgaagcgcgcgcgctgctggcg
cagaccgccgccgatcaggaactggccaaggtcaactacgaccgcgcccaggccctgatc
ggtaccggcgcggtgtcgaaggaatacttcagcgatcgcaagggcaattacgacgtggcc
gtggccgcgcgcaacgcggcgcaggcgcggctgacctcggcgctggaacggcagtcgttc
cagtcggtgcgcgcgccgttcgccggcgtggtggtggcgcgcaatgtcgaacgcggcgat
cgggtggtcggcgattcggcgtcctcgacggtgccgatgttcgagatcgccgtgctcgat
ccgttgcgggtggtggtcgacgtgccgcagaacgtgtcgatgcagatccagaacgggctg
gaagccgacgtgagctttccggaactgcccggccaggtgttcaaggcgcaggtcgcgcgc
agcgcgcgcacgctctcgcgcgacgccggtgtgatgcgcaccgagctgcgcctgcccaat
cccgacagccgtatcccggccggcatggtcggctccgcgcgcctgcacctgccgcgcgtc
gcgccggcggtggtgttgccggtgtcgacggtgatccagcgcgcgaccggcgtgcaggtg
gtcaccttgaaggcggactcgaccttgtcgtatcgcgacgtgaccctgggccgcaacctg
ggcaacgaagtcgaagtgctgaccggcatccaggccggcgacaccgtggtgctggcgccg
aacgcgctgctggccgacggcaacaaggtgcatgcgaaggcgttgcccccgccgaagaag
tcgtaa
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