Lysobacter capsici: LC55x_1100
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Entry
LC55x_1100 CDS
T04162
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lcp
Lysobacter capsici
Pathway
lcp01501
beta-Lactam resistance
lcp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC55x_1100
01503 Cationic antimicrobial peptide (CAMP) resistance
LC55x_1100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcp03036
]
LC55x_1100
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_1100
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_1100
Chromosome and associated proteins [BR:
lcp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LC55x_1100
Transporters [BR:
lcp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LC55x_1100
Antimicrobial resistance genes [BR:
lcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LC55x_1100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ALN84392
LinkDB
All DBs
Position
1231504..1232658
Genome browser
AA seq
384 aa
AA seq
DB search
MAACGKGGKAQGGPGGPGAGQGDRPTPVTAEQVHLRPWNDTVQALGNVKARESIVVSAKV
SEIVQAVHFDSGDHVAAGASLITLSGKAQLAALAQAEATAKEAEQLLKRQTELAAQQLIA
RSALDTQRATRDATRARVEQMKADIGDREIRAPFAGVLGIRQVSPGSLITPGTPIATLDD
TQRVYIDFPVPETLLARVAKGQSVTGTSAAYPGKRFEGQVSTIDARIDPATRAVTVRADF
PNPDHLLRPGMLVQVTLLQPQRQALLIPEISVVQVGTDSYVFRVKPDNTVERADVEVGTR
REGLAEIVEGLKVGDRVVVDGTGKLRVGGKVQVTAAAVPAAAPEQTREAEAEADASAPVP
AVQAPAVDAPAQKNAAAGKGNANG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctgcggcaagggcggcaaagcgcaaggcgggccgggaggtccgggcgcggga
cagggcgatcgacccaccccggtcaccgccgagcaggtgcatctgcggccctggaacgac
accgttcaggcgctcggcaacgtcaaggcgcgcgagtcgatcgtcgtttcggccaaggtc
agcgaaatcgttcaggcggtgcatttcgacagcggcgatcacgtcgccgccggcgcctcg
ctgatcaccctgagcggcaaggcccagctggccgcgctggcccaggccgaggccaccgcc
aaggaggccgagcagctgctcaagcgccagaccgaactggccgcgcagcagctgatcgcg
cgttccgcgctcgacacccagcgcgccacccgcgacgcgacccgcgcgcgggtcgaacag
atgaaggccgatatcggcgatcgcgagatccgcgcgccgttcgccggcgtgctcggcatc
cgccaggtcagcccgggctcgctgatcaccccgggcacgccgatcgccacgctcgacgat
acgcagcgcgtctatatcgatttcccggtgcccgagaccttgctggcgcgcgtggccaag
ggccagagcgtgaccggcaccagcgcggcctatccgggcaagcgcttcgaagggcaggtc
agcacgatcgacgcgcgcatcgatccggccacccgcgcggtcaccgtgcgcgccgatttt
cccaatcccgatcatctgctgcgcccgggcatgctggtgcaggtgaccttgctgcagccg
cagcggcaggcgctgctgattccggaaatttcggtggtgcaggtcggtaccgattcctac
gtgttccgggtcaagccggacaacacggtcgagcgcgccgatgtcgaagtgggcacgcgg
cgtgaggggttggctgaaatcgtcgagggcttgaaggtcggcgatcgggtggtggtcgac
ggcaccggcaagttgcgggttggcgggaaggtgcaggtgacggcggctgcggtgccggcg
gccgcgcccgagcagacgcgcgaggctgaggctgaggccgatgcgtccgcgccggtgccc
gcggtgcaagcgccggccgtcgatgcgcctgcgcagaagaacgccgcggccggcaagggc
aatgccaatggctga
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