Lysobacter capsici: LC55x_1922
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Entry
LC55x_1922 CDS
T04162
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC55x_1922 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_1922 (nth)
Enzymes [BR:
lcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LC55x_1922 (nth)
DNA repair and recombination proteins [BR:
lcp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC55x_1922 (nth)
Prokaryotic type
LC55x_1922 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ALN85201
LinkDB
All DBs
Position
complement(2124820..2125452)
Genome browser
AA seq
210 aa
AA seq
DB search
MFSRLQSLNPHPTTELEYSTPYELLVAVALSAQATDVGVNKATRKLFPIANTPRQIAALG
VDGLKPYIATIGLFNTKAANVVALSQQLIDLHGGEVPRDRAALEALPGVGRKTANVVLNT
AFGEPTIAVDTHIFRVSNRTGLAPGKDVVAVEQGLLKVVPQRYLQDAHHWLILHGRYVCK
ARKPDCPHCVIRDLCRFQDKTPGDPEPVAA
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcctgcaatcgctcaacccgcatccgaccaccgaactcgaatacagcacg
ccgtacgaactgctggtcgcggtcgcgctgtcggcgcaggccaccgatgtcggcgtcaac
aaggccacgcgcaagttgtttccgatcgccaatacgccgcggcagatcgccgcgctcggc
gtcgacggcctcaagccctacatcgccacgatcggcctgttcaacaccaaggccgcgaac
gtggtcgcgctgtcgcaacaactgatcgacctgcacggcggcgaagtgccgcgcgatcgc
gccgcgctcgaagcgctgcccggagtcggccgcaagaccgccaacgtcgtgctcaacacc
gcgttcggcgaacccaccatcgcggtcgacacgcacatcttccgggtgtccaaccgcacc
ggcctggcgcccggcaaggatgtggtcgcggtcgaacaaggactgctcaaagtcgtccca
caacgctacctgcaggacgcgcatcactggctgattctgcacggacgttacgtttgcaag
gcacgaaaacccgattgcccgcattgtgtcatccgtgatctttgtcgcttccaggacaag
acgccaggcgatcccgagcccgtagcggcttga
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