Lysobacter capsici: LC55x_3170
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Entry
LC55x_3170 CDS
T04162
Name
(GenBank) polysaccharide lyase family 8, super-sandwich domain protein
KO
K19049
chondroitin AC lyase [EC:
4.2.2.5
]
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LC55x_3170
Enzymes [BR:
lcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.5 chondroitin AC lyase
LC55x_3170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lyase_8
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
ALN86433
LinkDB
All DBs
Position
complement(3593315..3596590)
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AA seq
1091 aa
AA seq
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MSAFIQRVLLPALAACLLSLSATAFAGETLLAQYFDIKTGSAAGTEVVGKVNLLSNKDAH
KTPVPADYTLAIASDPSNLFQIVNQRDAQSRLFGALRVKAGQTVPVAPADYPLTVALQQR
GVTLATASFNVRALAQTQLDKMLAYTKAYCLNQDRLFGRARYAEAEITRLIVETEINGGR
FNGYEFYTRPITDYLPGGPGTGQGRKTLSTQWQEVATKIGGLGFAYQNVDSKYPLTYGPN
GTPANHERLKNALYAALREYIDKVPIDPAQVIVNGSPIGGDYGDGIMRLWEKKILSYNDT
THSWIWTDAVTGPAVWLQSDLLNDIARGDAAAKALHEGLVRFLQIGYGLPIDNREVNDPS
ARWGQLVNANYTEGAFADANHFHRLRGWLALPTIWADYNRPITYVPHWYDGYFSAYPGFQ
LRPGWSPRGSLQDLRFWTTNILVPAHLYPQSGFHPDGMITHHYDDGVDGRAMWAYGYEWM
VAPIDGNALFKRLGLDAGGGDFNLISNMYLYTYDKLIYRGEMDAALLGRSYLGDVKKFTA
TMPATINQMIAARPATTPIDREQELVAWGAALKGGTQQSSGNFPFWVGNYMVHRKGGQAG
DAGSYMFSVVMGNDAMGATDDFDDPPKLFHVSSGLLFARTAGTEYALDARKRWDWHALPG
LTEELRTDAIPGGAHADQIDGSAYAGTASDGVRGFAAMHYRPADTQTYASARADKAWFFP
GDEAIALGSGIARRAAGQGRAILTTLDQTRWVGNLTYSIGGGAQTTVMQGAALDQALAVN
APSWFHQGRTGYFVFPTQAQQVRIRGGSAIVPTDTDADPAVNLIHLAIDHGTNPQAATYH
YEIVPNIGVEQMPARLLALQERIKVVANDEKLQGIYDRGTRTLQLAFHAEGAATWGAGMT
VTVDQPALIQLHDNGTSWDLSASDPIHDLSAKELNITLSVALKPGIYEHVLPGIVPRAGK
PISVTRPSAGVSHIRVPLPDANDGASLGYQEALYANVPIRVSIPVDNTVAVALAGGSEGG
TLAARAPASAPASAHGTATQAFPFALLVDALEKGKAMSQASVAAMAAAPVGIKALTLLLI
VLGFGLALRNP
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcattcatccaacgcgtgctgttgccggcgctggcggcctgcctgctttcgctc
agtgccacggcgttcgccggcgaaacgctgctcgcccagtacttcgacatcaagaccggc
agcgccgccggtaccgaggtcgttggcaaggtcaatctgctgagcaacaaggatgcgcac
aagacgccggtgccggcggactacacgctggcgatcgcctcggatccttccaatcttttc
cagatcgtcaatcagcgcgacgcccagagccgtttgttcggcgccttgcgggtgaaagcc
ggccagaccgtgcccgtcgcacccgcggactatccgctgaccgtcgccttgcagcagcga
ggcgtgacgctcgcgaccgcgtcgttcaatgtgcgcgccctggcgcagacacagttggac
aagatgctggcgtacacgaaggcttattgcctcaatcaggatcgtttgttcggccgcgct
cgctatgccgaggccgagattacccgcctgatcgtcgaaaccgagatcaacggtggccgc
ttcaacggctacgagttctacacccggccgatcaccgactaccttcccggcgggccgggg
accgggcaggggagaaagacgctgtcgacgcagtggcaggaagtggccactaagatcggc
ggactgggctttgcctatcagaatgtcgacagcaagtatccgctgacctatggcccgaac
ggaacgccggcgaatcacgaacgcctgaagaatgcgctgtatgccgcgctgcgcgagtac
atcgacaaggtgccgatcgatccggctcaggtgatcgtcaacggttcgccgatcggcggc
gattacggcgacggcatcatgcgtctgtgggaaaagaaaatcctgagctacaacgacacc
acgcactcgtggatatggacggacgcggtgacggggccggcggtatggctacagtccgac
ctgctgaacgacatcgcccgaggcgatgccgcggccaaggcgctgcatgaaggtctggtg
cgatttctgcagatcgggtacggcctgccgatcgacaatcgcgaggtcaacgatccttcc
gcgcgttggggccaactcgtcaacgccaattacaccgaaggcgcgttcgccgacgcgaat
cacttccaccgcttgcgcggatggctggccttgccgacgatctgggccgattacaaccgc
ccgatcacctatgttccgcactggtacgacggatacttctcggcctatccgggctttcag
cttcgcccgggctggtcgccgcgcggttcgctgcaggacttgcggttctggacgacgaac
atcctggtgcccgcgcacttgtatccgcagtcgggatttcatccggacgggatgatcacc
catcactacgatgacggcgtggacggccgcgcgatgtgggcctatggctacgagtggatg
gtcgctcccatcgacggcaatgcgctgttcaagcggctggggttggacgcgggcggcggc
gacttcaacctgatttcgaatatgtacctgtacacctacgacaagctgatctaccgcgga
gagatggatgcggcgctgctgggacgcagttatctgggcgatgtgaagaaattcaccgcc
actatgccggccaccatcaaccagatgatcgccgccaggccggcaaccacaccgatcgat
cgcgagcaggaactggtggcgtggggagccgcgttgaagggcggcacccagcagtcgagc
gggaattttccgttctgggtcggcaactacatggtgcaccgcaagggcggccaggccggc
gatgccggctcctatatgttctccgtggtcatgggcaatgacgcgatgggagcgaccgac
gatttcgacgatccgcccaagctgtttcatgtctcgagcggcctgttgttcgccaggacg
gcgggaacggaatatgcgctcgatgcgcgcaaacgctgggactggcatgccttgcccgga
ttgaccgaagaactgcgcaccgatgcgatccccggcggcgcccatgccgatcaaatcgac
ggcagcgcctatgccggcacggcctccgatggcgtgcgcgggttcgccgccatgcactac
cgtcccgccgacacgcaaacctatgcgagcgcgcgggccgacaaagcctggttctttccg
ggcgatgaagcgatcgcgctcggcagcggcatcgcgcgacgcgccgccgggcaagggcgt
gcgatcctcaccacgctggatcagacgcgctgggtaggcaatctgacctattcgatcggc
ggcggcgcgcaaacgaccgtgatgcagggagccgcgctggatcaggccctcgcggtcaac
gcgccttcctggttccatcagggccgaacgggttatttcgtgtttccgacgcaggcccag
caggtgcgcatccgcggcggcagcgccatcgtcccgaccgacaccgacgcggatcccgcg
gtcaatctgatccacttggcgatcgatcacggcaccaacccgcaggcggcgacctaccac
tacgaaatcgtgccgaacatcggcgtcgaacagatgcccgcgcgtctgctcgcgctgcag
gagcggatcaaggtggtggccaacgacgagaagctccagggaatttacgatcgcggcacc
cggacgctgcaattggccttccatgccgagggtgccgcgacctggggcgcgggcatgacg
gtcacggtcgatcagccggcgctgatccagcttcacgacaacggaacgagctgggatctg
agcgccagcgatccgatccacgacctgtccgcgaaggaactcaacatcacgctgtcggtc
gcgctcaaaccagggatctacgagcatgtcttgccgggcatagtcccccgcgcgggcaag
cccattagcgtgactcggccatcggcaggggtttcccatatccgcgtgccgctgcccgat
gccaacgacggcgccagcctgggttaccaggaggcgctctatgccaacgtgccgatccgg
gtgagcattccggtcgacaacacggtggccgtcgctctggccggcgggagtgaaggcggc
acgcttgccgcgcgagcacccgcatccgcacctgcgtccgcgcatggaaccgcaacgcag
gcatttcccttcgcgctgctcgtcgacgcgctcgaaaagggcaaggccatgtcgcaagcg
tcggttgcggccatggctgcggcaccggtcgggataaaggcgctgaccttgcttttgatc
gtcctgggtttcggcttggcgctacgaaatccataa
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