Lysobacter capsici: LC55x_3316
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Entry
LC55x_3316 CDS
T04162
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_3316 (dksA)
03021 Transcription machinery [BR:
lcp03021
]
LC55x_3316 (dksA)
03009 Ribosome biogenesis [BR:
lcp03009
]
LC55x_3316 (dksA)
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Other transcription factors
Others
LC55x_3316 (dksA)
Transcription machinery [BR:
lcp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
LC55x_3316 (dksA)
Ribosome biogenesis [BR:
lcp03009
]
Prokaryotic type
rRNA transcription factors
LC55x_3316 (dksA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
ALN86578
LinkDB
All DBs
Position
complement(3744812..3745879)
Genome browser
AA seq
355 aa
AA seq
DB search
MKKPAKKAAKAAKKTAKPAAKKAAAPAAKPAPKKAVSTKPVAKKAAAKPAPASKATASKA
AAKKVTPAPAKAAAVKKPAAAPAAKKAAPAPSKPAAANKPTASKVSGTKKPELKKVEVKK
PEAVKPAAKPADKQPAPPKPAKAASAGPADSIISDQSKNTVTQPVSSKTPAAKPATTTPA
PATRPAGKVAVAITAKTQQTPAPKTKVKVVAYKNDPATGRPIVPDGYKPASDEEYMSPLQ
LEYFRQRLLQWRTDLVEESKQTIENLKDEVRDVGDEAERATRETENSLELRTRDRYRKLI
SKIDSTLKRVDSGDYGFCVDTGEEIGLERLEARLTAERTIDAQERWEHLQKQMGD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaacctgcgaagaaggccgccaaggccgccaagaagaccgccaagccggctgcg
aagaaggcggccgcgcccgcggccaagcccgcgccgaagaaggccgtctccaccaagccg
gtggcgaagaaggcggcggccaagccggccccggccagcaaggccacggcgagcaaggcg
gcggcgaagaaagtcaccccggcgcccgccaaggcggccgcggtgaagaaaccggcggcg
gcgcccgcggcgaagaaggcggcgcccgcgccgtccaagccggcggcggcgaacaaaccc
acggcgagcaaggtcagcggaacaaagaagcccgagcttaaaaaagttgaagtgaaaaag
cccgaagctgtgaagcccgcagccaagcctgccgacaaacagcccgccccgcccaagccc
gccaaggcggcttccgcgggaccggccgacagcatcatctccgaccaaagcaagaacaca
gtgacccaaccagtatccagcaagacacccgcggccaagcccgcgacaacgacccccgcc
ccggccacgcgcccggccggcaaggtcgccgtggccattacggccaagacccagcagacg
cccgcgcccaagaccaaggtcaaggtcgtggcctacaagaacgatcccgcaaccggtcgt
ccgatcgtgccggacggttacaagccggcctccgacgaggagtacatgagcccgttgcag
ctcgagtacttccgtcaacgcctgctgcaatggcgtaccgacctggtcgaggaatccaag
cagaccatcgagaacctcaaggacgaagtgcgcgacgtcggcgacgaagccgaacgcgcg
acgcgtgagacggagaactcgctcgaactgcgtacccgcgaccgctatcgcaagctgatc
agcaagatcgacagcacgctcaagcgggtggattcgggcgattacggtttctgcgtcgac
accggcgaagaaatcggcctggagcgcctggaagcgcgcctgaccgccgaacgcaccatc
gacgcgcaggagcgttgggagcatttgcagaagcagatgggcgactga
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