Lysobacter capsici: LC55x_3348
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Entry
LC55x_3348 CDS
T04162
Name
(GenBank) HAMP domain protein
KO
K18072
two-component system, OmpR family, sensor kinase ParS [EC:
2.7.13.3
]
Organism
lcp
Lysobacter capsici
Pathway
lcp01501
beta-Lactam resistance
lcp01503
Cationic antimicrobial peptide (CAMP) resistance
lcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC55x_3348
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC55x_3348
01503 Cationic antimicrobial peptide (CAMP) resistance
LC55x_3348
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcp01001
]
LC55x_3348
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lcp02022
]
LC55x_3348
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_3348
Enzymes [BR:
lcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LC55x_3348
Protein kinases [BR:
lcp01001
]
Histidine kinases
OmpR family
LC55x_3348
Two-component system [BR:
lcp02022
]
OmpR family
ParS-ParR (polymyxin-adaptive resistance)
LC55x_3348
Antimicrobial resistance genes [BR:
lcp01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
LC55x_3348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_2
HATPase_c_3
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
ALN86609
LinkDB
All DBs
Position
complement(3779549..3780982)
Genome browser
AA seq
477 aa
AA seq
DB search
MSGGRGSIWADRARRWFGPASPLRRVFAADGAGGKSRHGHFSLFVRYYLTVLLIYAAVII
GGVSAWIYITDENSRDYSQAQMRGTHYLIEQRYLHTDPAQWPALTEELRAHFAYPLNLVP
LDSLQADLTPAEWQRLQRGALVMESENEAYTYQRLPGTDQVVALGDFDEVIVHGVPWRDL
DFVDSLVMLAMYFLAIALPLYFLVYRFWRDLRKLRATAEALSAGDLDARAPEVVTRLVNP
LGHALNRMAGQVQQVLESQRILAQAVAHEIRTPLTRMRFALEMLESADDERERANLQHGL
EADIRRLEHLAANSVTYARIGRMVGIERGEIDLRALFADLADIFAPPASLHLRFDRGGID
SVQANREALELALRNLITNALRHARSAIEVSVVQEGDSTVFRVDDDGEGVQEDLSQQVFL
PFTQLRKNPDGFGLGLALVRVVAEKHGGRATVAPSSLGGACFRIELPSYPLHPAVSC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgggcgcggctcgatctgggccgatcgcgcccggcgctggttcggcccggcg
tcgccgctgcgccgcgtgttcgccgccgacggcgcgggcggcaaatcccgtcacggccat
ttcagcctgttcgtgcgttattacctgaccgtgttgctgatctatgccgcggtcatcatc
ggcggcgtgtcggcctggatctacatcaccgacgaaaacagccgcgactactcgcaagcg
cagatgcgcggcacccattacctgatcgaacaacgctatctgcacaccgacccggcgcag
tggccggcgttgaccgaagaactgcgcgcgcacttcgcctatccgctgaacctggtcccg
ctcgactcgctgcaagccgacctgaccccggccgaatggcagcgcctgcaacgcggcgcg
ctggtcatggagagcgagaacgaggcctacacctatcagcggctgccgggcaccgaccag
gtcgtggccctgggcgatttcgacgaggtgatcgtgcacggcgtgccgtggcgcgatctg
gatttcgtcgattcgctggtgatgctggcgatgtacttcctggcgatcgccttgcccttg
tacttcctggtctatcgattctggcgcgacctgcgcaagctgcgcgcgaccgccgaagcg
ctgagcgccggcgacctggacgcgcgcgcgcccgaagtggtcacgcgcctggtcaacccg
ctcggtcacgcgctcaaccgcatggccgggcaggtgcagcaggtgctggaaagccagcgc
atcctcgcccaggcggtcgcgcacgagatccgcacgccgctcacgcgcatgcgcttcgcc
ctggaaatgctggagtcggccgacgacgagcgcgagcgcgcgaatctgcagcacgggctg
gaagcggacatccggcgcctggagcatctggccgcgaacagcgtcacctatgcgcggatc
ggccgcatggtcgggatcgagcgcggcgagatcgacctgcgcgcgctgttcgccgacctg
gccgacatcttcgcgccgccggcatcgctgcatctgcggttcgaccgcggcggcatcgac
agcgtccaggccaatcgcgaggcgctggaactggccctgcgcaatctgatcaccaacgcg
ctgcggcatgcgcgctcggcgatcgaggtcagcgtcgtgcaggaaggcgacagcaccgtg
ttccgcgtcgacgacgacggcgagggcgtgcaggaggacctgagtcagcaggtcttcctg
ccgttcacccaattgcgcaagaaccccgacggcttcggcctggggctggcgctggtgcgg
gtagtcgcggagaagcacggcggccgcgccacggtggcgccgtcgtcgctgggcggcgcg
tgcttccggatcgagcttccgagttatccgttgcatccggcggtgtcctgctga
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